Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MSMNANTMIFMILGASIVMAIACLMDMNALLDRFHNYILPHLRGEDRVCHCNCGRHHVHYVIPYDGDQSVVDSSENYFVTDNVTKQEIDLMLGLLLGFCISWFLVWMDGVLHYAVRAWRTSRRYDNSWSWIPKFCNLKELRKRHHRQYEEATGNMVHIKQKLYHNGHPSPRHL |
1 | 6djyB | 0.11 | 0.11 | 3.92 | 0.72 | SPARKS-K | | PRAGVTQLKSLLTQLADPLCLALDGHVYHLYNVMANNFIPNTDGQ------FHSFRACSYAVKDGGNIYRVVQNGDELNESLLIDTAIVWGLLGNTTPTIHLKTSIDAICSVEGILLLTTIPGYEDELNKLRTGIQYRRARESIKNMLGSGDYNVA-PLHFLLHTEHRSTKLS |
2 | 4od4A1 | 0.11 | 0.07 | 2.50 | 0.63 | FFAS-3D | | -PFTLADAILMAAAVVGLRMAGMAY--NNIADL-------------------------------DIDRLNPRTAKRPLVVGAVSLREAGSAIYFASAALLNTYALLLSPLVLAIALTYPHAKRLHPLPHLHLGIVSLGEVLR------------------------------- |
3 | 2d0tB | 0.14 | 0.09 | 2.98 | 0.30 | HHpred | | ----------DTLLKALLEIASCLEKALQVFHQIFSVLRIYLSGWKGN-P--QLSDGL----VYEGFW---EDPKEFAAGQSSVFQCFDVLLGIAAQFL-------------QDMRRYMPP-AHRNFLCSLESNPSVREFVLSK----------------------------- |
4 | 6b5bA | 0.16 | 0.16 | 5.17 | 0.62 | MUSTER | | TELLSSRQEDQDLGLYYLRQIDSPLKAINSFNIFLYYVSSHSSSK-------AAPTVVSHLL-VDEKESLENMSENYMKLHPQTFLWFQFVRGLWLVSPESSSSFVSEHLLRLALIFAYESNTVAECSPFILQFLRGKTLRVLNLQYFRDHPESLLSLKVSIFAQDEEIIKNY |
5 | 4bocA | 0.11 | 0.08 | 2.90 | 0.71 | CNFpred | | FVWEASHYLVRQVFKSLQEMFSGTRAIQHWLTESARLISHMG----SVVEWVTP-LGVPVIQPYRLD-RKPN----------TRKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTFVSV----DCYWTHAADVSVMNQVCREQ----------------------------- |
6 | 2pffB | 0.20 | 0.17 | 5.55 | 0.62 | HHsearch-2 | | LSIISCPLIGVI-------QLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTA-----V-----AIAETDSWESFFVSVRKTVLFFIGVRCY------EAYPNLPPSILEDSLENNEGVPSPMLSISNLTDYVNKTNSHLPAGKQVEIGAKNLVVPPQSLYKAKAPSERKL |
7 | 3ddeA | 0.09 | 0.09 | 3.30 | 0.59 | Neff-PPAS | | -KATKALYAIYTETYHYTKHNAKNQALVGIPGKYLSFCFHHAHEEAG------HELALSDIASIGFDREDVLSSKPLPATETLIAYLYWISANPVQRLGYSYWAENVYGYIDPVLKAIQSTLDLTPQSKFFIAHSKIDAKHAEEVNELHEVCKDDVWKEYQLFQSGASDRYAF |
8 | 1r7mA1 | 0.14 | 0.08 | 2.58 | 0.50 | HHsearch | | ---------------------------------------------------NIKKN------QVMNLGPNSKLLKEYKSQLILNIEQFEAGIGLILG----------DAYIRSR------DEGKTYEWDHVCL--LYDQWVLSPPHKKENHLGNL-VITWGAQTFKHQAFNK- |
9 | 2r5gA2 | 0.10 | 0.08 | 3.01 | 0.55 | SP3 | | --LSPKYKESFDVGCNLFAKFSAYIKNKEANKNFEKSLLKEFKRDDYLNTPLLDE------IDPDSAEEPPVSRRLFLDGDQLT----------LADCSLLPKLNIIKVAAKKYRD-FDIPAEFSGVWRYLHNAYAREEFTH-TCPEDKEIENTYANVAKQKS---------- |
10 | 2po4A2 | 0.10 | 0.09 | 3.20 | 0.58 | PROSPECTOR2 | | DLYQASTNALMESLGKLRSNYASNMPIQSQIDSLLSLMDLFLPDINL------------------------GENGALELKRGIAKNPLTITARGIAGKLVSSVTDAIYERMSDVLKARAKDPNISAAMAMFGKQAASEAHAEELLARFLKDKGVLELQSTGTGAKGKINPKTY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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