Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | AEPFVPSHGDPAWNTGCDRHMAVHDRLDVIEETVEKTVEHLEAEVKGLLGQLEELAWNLPPGPFSPTPDLLGDD |
1 | 2o0i12 | 0.16 | 0.15 | 4.95 | 0.70 | SPARKS-K | | IEEVRTNANDPKWTE--ESATEVLTGLDTIKTDIDNN-PKTQTDIDSKIVEVNELEKLLVLKLAAALEHHHH-- |
2 | 5yi4A | 0.16 | 0.11 | 3.58 | 0.57 | FFAS-3D | | -----------------EKCEAIGVKLLHLEDQLLGAMQSLQGELQTVKETLQAMILQLQPTKEAG-------- |
3 | 5xbjA | 0.12 | 0.11 | 3.84 | 0.28 | HHpred | | -NPNEN----ATKQTLTESVNNTFATLDKIQKKVNDDIKNTVDEINRIGEEIATINKQIYGQLPEHANELRDR- |
4 | 5j2lB | 0.14 | 0.14 | 4.64 | 0.85 | MUSTER | | SEDYKLREAQRELDKQRKDTEEIRKRLKEIQRLTDETADELIKELREIIRRLQEQSEKL-REIIEELEKIIRKR |
5 | 4ut1A | 0.11 | 0.07 | 2.43 | 0.45 | CNFpred | | --------------TLASQLVAAGQQYSQLRQSVNSQLTDTVTQINSYTSQIAQLNEQI--------------- |
6 | 2r2vA | 0.20 | 0.08 | 2.59 | 0.38 | HHsearch-2 | | -------------------------KLKQVADKLEEKLYHNANELARVAKLLGER------------------- |
7 | 2lhrA | 0.12 | 0.12 | 4.28 | 0.74 | Neff-PPAS | | DYVDEETYNLQKLLAPYHKAKTLERQVYELEKLQEKLPEKYKAEYKKKLDQTRVELADQVKSAVTEFENVTPTN |
8 | 2r2vA | 0.20 | 0.08 | 2.59 | 0.46 | HHsearch | | -------------------------KLKQVADKLEEVLYHNANELARVAKLLGER------------------- |
9 | 2l2dA | 0.12 | 0.12 | 4.26 | 0.72 | SP3 | | AECWAALLHDPMTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALSDYEQLRQVHTANLPHVFNEGRG-- |
10 | 5wahA | 0.10 | 0.09 | 3.53 | 0.47 | PROSPECTOR2 | | GVEKTAGETSATDTG--KREKQLQQWKNNLKNDVDNALLELENQFNETNRLLEEVEKDKKAKQQKTLKQSDTKV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|