Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | MFLFSRKTKTPISTYNDSYRAPTSIKEVYKDPPLWAWEANKFVTPGLTQTMERHVDPEALRKMVKCNNQDYTYKSSISGHPYLPEKYWLSQYEADKCSPCYLSSDRYNTWRTAPYNSPYWNKYTTCLPRLPKDAGMETVARGMPLEYPPKPERLNAYEREVVVNMLNSLSRNQQLPRVMPRCGCLDPLPGRLPYLGYESACSGRHYCLRGMDYCTGEAPYTERRLRPLCAEQPTGCVTLRPPARNGMCCYNSPAVILPMSEP |
1 | 2cseH | 0.11 | 0.11 | 3.88 | 1.15 | Neff-PPAS | | -SLQRKLKHLPHHRCNQQIRHQDYVDVQFADRVTAHWKRGMLSFVCQMHAMMNDVSPEDLDRVRTEGGSLVELNWQVDPNSMFRSIHSSWTDPLQVVDDLDTKLDQYWTALNLMIDSSDLVPNFMMRDPSHAFNGVRLEGDARQTQFSRTFDSRSSLEWGVMVYDYSELEHDPSKGGLSHYSRATTPILGKMPFSGMLTGNCKMYPFIKGTAKLKTVRKLVDSVNHAWGEKIRYALGPGGMTGWYNRTMQQAPIVLTPAALT |
2 | 4btgA3 | 0.08 | 0.08 | 3.16 | 1.04 | PROSPECTOR2 | | GFNLKLKNQLSVGALQLPLQFTRTFSASMTSELLRLWSPSTPKELDPSARLRNTNGIDQLRSNLDMVKQRGRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLPMVAIAALRTGIVDESLEARASAVAHNPEVVVSEHQGVAAEQGSLYLVWNVRTELRIPVGYNAIEGGSIRTPEPLEAIAYNKPIQPSEVLQAKVLDIHIWP |
3 | 3j3iA | 0.11 | 0.10 | 3.62 | 0.81 | SPARKS-K | | SRLVTQMDATPQMRIFSDTADYADMLHLTIFEGLWLVQDASFLVNGEKLLSADRAGYDVLVEELTLANIRIEHHKM-------PTGAFTTRWVAAKRDSALRLTPR--SRTAHRVDMVR---ECDFNPTMNLKAVSEVPLAHVFRSPPRRESTTTTDDSPRWLTREGPQLTRRVPIIDEPPAYESGRSS--SPVTSSISETSQHEEEMGLFD--AEELPMQQTVIATEARRRLGRGTLERIQEAALEGQVAQGEVTAEKNRR |
4 | 5hx2F | 0.10 | 0.06 | 2.13 | 0.46 | FFAS-3D | | --IFRNLAGYRLRTYYGSPRPEELANAIYGNPQLY-W--VLLMCNDNYDPYYGWITSQ--EAAYQASIQKYKNVGGDQIV------YHVNENGEKFYNLISYDDNPYVWYDKGDKARKYPQYEGALAAVDTYEVLENEKLRQIKIIAK-------SDINSFMNDLIRIMEKS------------------------------------------------------------------------------------------ |
5 | 2pffB | 0.14 | 0.12 | 4.15 | 0.35 | HHpred | | ----YLKGATGLIAETDSWESFVSVRKAITSLPPSILEDSLENNEGVPSPSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPQSLYG---LNLT----LRK---AKAPSGLDQS---RIPFSERKLKFSNFLPVASPFHSHLLVPANKDLVKNN---VSFNAKDIQI-PVY---------DTFDGSDLRVLSGSISERIVD-------CIIRLPVKWETTTFKATHILDFGPGSGLVIVAGTLDINPDD-- |
6 | 1uf2T1 | 0.16 | 0.14 | 4.72 | 0.64 | MUSTER | | ---MSRQMWLDTSALLEA--ISEYVVRCNGDTTGDFNALSNMFTQLSVSSAGYVSDPRVPLQTMSNMFVSFI--TSTDRCGYMLRKTWFNSDTKPTVSDDFITT--YIRPRLQPMSDTVRNNLSLQPSAKPKYERQNAIMKGLDIPYSEPDFDVSDF----LTTFLSQLRACGQYEIFS---DAMDQLTNSL-ITNYMDPPAI----PAGLAF---TSPWFRERARTILALQNVDLNIRKLIVRHLWVITSLIAVFGRYYRP |
7 | 5lg6A | 0.09 | 0.03 | 1.32 | 0.39 | CNFpred | | -------------------------------------------------------DEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALD----NTLFLNGEKEYMPWQAALSSLSYF------SLMFDR-----SEVYGPMKKYLRKQVEPLFQHFETL------------------------------------------------------------------------------------------ |
8 | 2pffB | 0.17 | 0.15 | 5.03 | 0.63 | HHsearch-2 | | KRPFDKKSGNAQLVATDDYF--EELRDLYQTYHVTTLDAEKVFTQGLNILLENPSNTIPLIGVIQLALRSYLKGATGHSQGLAETDSWESFFVAVRCYEAYPN--------TSLPPSILNNVPSPMLSNLTQEQVQDYVNSHLPAGKQVEPQSLYGLNLTLRKAKA---P--SGLDQSRPFS------ERKLKFSNRFLPASPFHSHVPASDYDTFDGSDLRVLSGSISERI--VDCIIRLPVKWETTTQFKATHILD-FGP |
9 | 3cnfT | 0.08 | 0.08 | 3.27 | 1.09 | Neff-PPAS | | LFRLPLKYPSKAIPADELIDNLHSWMRSVHLLHVRSEDNTLRYNWMLGVYARSTNYTTPVGQLVVNAPAILNYSNPQDAFNSVFVALGIDYIDIPITNSNIFSSTPYNVRIWHAPTMTEVNHILALMRKSTLVSTHSSWHWDVLFHYRSESDMIDHFAAKILEDWRQEKLDKGALVEADRVVQRLIPLSSSTYVQAAISRLSTALLQLSDTYYQHANDQLRRLYRRMYNDSRTLYMTQRHQELLLAQITADPNILLYPYTYI |
10 | 3gniA1 | 0.15 | 0.06 | 2.05 | 0.59 | HHsearch | | PFPFGKSHKSPA-----------DIVKNLKESMAVLEKQDI----------SDKKAEKATEEVSKNLVAEILYGTNKEPQT-----------E------------AVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQ--------------------IFNNILRR---------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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