Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KELVDAAEKWCTGNPFDLIFAEDVDERRLDFYAEPGISFYVLCPDNLTGGTDNFHVWSESEDCLPFLQLAQDYISSCGKKTLLEVLDKVFRSFRPLLGLPDIDDDTFDQYHADVEEEPEPDHQQMGVSQQ |
1 | 2l69A | 0.15 | 0.12 | 4.17 | 0.65 | SPARKS-K | | EETLRKFKDIIKKNGFKVRTVRSPQELKDSIEELV------------KKYNATIVVVVVDDK--EWAEKAIRFVKSLGAQVLEEFSREVRRRGFEVRTVTSPDDKSLERLIREVGSLEHHHHHH------ |
2 | 1w63M1 | 0.10 | 0.08 | 3.15 | 0.59 | FFAS-3D | | EHFMPILMEKEEEGMLSPILAH--GGVRFMWIKHNNLYLVATSKKNACV-------SLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMGYPQTTD------SKILQEFITQEGHKLETG-- |
3 | 2qm4A | 0.21 | 0.15 | 4.65 | 0.25 | HHpred | | ------LEQGLL-QPWAWLQLA---ENSLLAITKQGYALLVSDLQ---------QVWHEQVDTSVVSQRAKELNKRLT-APPAAFLCHLDNLLRPLLKDAAHPEATFSCDC------------------- |
4 | 3gqmA1 | 0.17 | 0.15 | 5.05 | 0.64 | MUSTER | | TSFAEHVNTLDSHKNYVVIVND----GRL------GHKFLIDLPALTQGPRTAYIIQSDLGGALPAVR-VEDWISRRGSDPVS--LDELNQLLKDFSKMPDDVQTRLLASILQIDKDPKVDIKKLHLDGK |
5 | 2qm4A | 0.16 | 0.12 | 4.10 | 0.57 | CNFpred | | -SGMEELEQGLLMQPWAWLQLAE-NSLLAKVFITQGYALLVSDL---------QQVWHEQVDTSVVSQRAKELNKRL-TAPPAAFLCHLDNLLRPLLKDA-----------------AHPSEATFSCDCV |
6 | 2pffB | 0.11 | 0.11 | 3.86 | 0.68 | HHsearch-2 | | NDIHALAAKLLQENDTTLVKTKEMAKR--PFDKKSNSALFRAVGEG---NAQLVAIFGGQGNTDDYFEELRDLYQTYH-VLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEENPSNTPDKYLLSIP |
7 | 1w9rA | 0.16 | 0.14 | 4.61 | 0.71 | Neff-PPAS | | EKKVAEAEKKVEEAKKKAEDQKEEDRRNY--------------PTNTYKTLELEIAESDVEVKKAELELVKEEAKERNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKP--- |
8 | 1vt4I3 | 0.22 | 0.20 | 6.31 | 0.75 | HHsearch | | RSIVYNIPKTFDSDPYLLKNIEH-PERRMVF------LDFRFLEQ---KIRHDSTAWNASGSILNTLQQLKFYKPYCDPKLVNAILDFLPKIEEN-LICSKYTDLLRIALMAEDEAIFEEAHKQVQRGG- |
9 | 2pe6A | 0.19 | 0.17 | 5.47 | 0.75 | SP3 | | SRLAQERKAWRKDHPFVAVPTKNPDGTECAIPGKKGFKLRMLFKDDFEPPLFHPNVYPSGTVCLSILEEDKDWRPAIT-------IKQILLGIQELLNEPNIQDEAYTIYCQNRVE-----YEKR-VRAQ |
10 | 2p0sA | 0.08 | 0.07 | 2.78 | 0.53 | PROSPECTOR2 | | DKTGEYEQLFKENDEFRFVHAEKTAEEYRKGADKSGIDAVLEIRQDLLEDPNAVAIYGYKQLPASVSNH------------ISRILSDYLSDKKIASYNIPDIKQILADSKIELSVHTYKWSETSGELAS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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