Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MNRSSQDTGSRGIHEDRKLYVVDSINDLNKLNLCPTGSQHLFPLEEKMPDVGTNSGNGSHSLFFVGLIIVLIVSLALVSFVIFLIVQTGNKMDDVSRRLIAEGKDIDDLKKINSMIVKRLNQLDSEQN |
1 | 4zwjA | 0.06 | 0.05 | 2.34 | 0.74 | SPARKS-K | | FTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYT-----------------LKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIYVIAFLICWVPYA |
2 | 6b85J1 | 0.17 | 0.09 | 3.07 | 0.69 | FFAS-3D | | ------------------------------------------------------SKDTEDSRKIWRTIMLLLVFAILLSAIIWYQITTNPDTSQIATLLSMQLLLIALMLVVIALLLSRQTEQ----- |
3 | 5x5yG | 0.12 | 0.05 | 1.95 | 0.28 | HHpred | | ----------------------------------------------SNSETIMAAGVSLSRIVWAVMKPMLVLMLAGILVGEYVAPWTENIAQSGRALAQGGGDSQ---------------------- |
4 | 5k04A3 | 0.16 | 0.15 | 4.96 | 0.66 | MUSTER | | FNKITSNAKF--SVFDNLLYLYFNLLKITKTKLNPQETQSLYNYLQKNLKTDKLKILIPENLLSGELTQNLTNLVEFIKIVKLLAKRHPSSYMNQLVNLVKP---GKEFKNLK-LVQRQHEIIDFEPP |
5 | 4u8yA | 0.18 | 0.09 | 2.80 | 0.53 | CNFpred | | ------------------------------------------------------------SINTLTMFGMVLAIGLLVDNAIVVVE-------NVERVMAEEGLPKEATRKSMGQIQGALVGIAMVLS |
6 | 3jc8Na | 0.15 | 0.10 | 3.42 | 0.43 | HHsearch-2 | | --------------------------MMIRINLLP--------VRAVKKRE-------MGRQVLVLFAVVLIGAGVANYLWYDDREAHQAGVASTKARIAELEKIVKNINTRKAEVEKKLAVLDALRK |
7 | 5yfpH1 | 0.13 | 0.10 | 3.55 | 0.63 | Neff-PPAS | | ------------------------RKMLANPHFNAKDHDKLGNASAITIDKFTSNLTDLSIQVQEEVKLNINKSYNEIMTVNNDLNVAMLELKRVRANINDLNEVLDQCTKIAEKRLQLQDQIDQER- |
8 | 3jc8Oa | 0.08 | 0.05 | 1.88 | 0.37 | HHsearch | | ----------------------------------------MDKYLDQ-----FVKAPPAIKFGG----LAFVVGALTAANFFMVIQPTEEEIGWAVAERRKLDLELADKSEIAQNLRREMDVLEQKL- |
9 | 5cwbA1 | 0.14 | 0.10 | 3.48 | 0.59 | SP3 | | -------------------------------DECEEKARRVAEKVERLKRSGTSED--EIAEEVAREISEVIRTLKESGSSYEVICECVARVAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKESG |
10 | 2hcmA | 0.07 | 0.07 | 2.90 | 0.56 | PROSPECTOR2 | | SLGTSEAAPPPFARVAPALFIAGATELLVRAGIVSRQQPGPRAPGVAELRVPVFDDPAEDLLTHLEPTCAAMEAAVRAVCTAYLMRHRGHSLDRAFQMVKSARPVAGFWAQLQKYEQTLQAQAILPRE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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