Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | RGRGEGLALSPLLPGVPPPPAMGVPRDRGGRGAGSQSTPRGGCLLPPRLGSQQPAGEEGLVLSPRLAGDASPCCDGSPKSQGVKRGWLSVPTSRGVPPPPAIGVLIARGGRGAGSQSLPRGWSFTPLRW |
1 | 5njtL | 0.14 | 0.13 | 4.50 | 1.14 | SPARKS-K | | KGRVS-------KVENSKSPALNKGYNSFKKEHTNVSSPQKRCTRVGTMTPKKPNSALRKYARVRLTNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGQGRSKYGTKKPKAK |
2 | 3boiA | 0.23 | 0.15 | 4.60 | 1.26 | MUSTER | | --------------------------CKGADGAHGVNGCPGT------AGAAGSVGGPGCDG-----GHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKG--------GSGTPKGADGAPGAP--- |
3 | 3boiA | 0.24 | 0.15 | 4.59 | 1.31 | Neff-PPAS | | ---------------KGADGAHGVNGCPGTAGAGSVGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKG------ADGAPGAP----------------------------- |
4 | 6emkG | 0.11 | 0.11 | 3.91 | 1.00 | SPARKS-K | | YASYHGRYLICVYLIQLGHDKHELIKTFKGNTCVHLALMKGHELLQQFPRFINHRGENGRAPIHIACMNDYYQCLSLLIGVGADLW--VMDTNGDTPLHVCLEYGSISCMKMLLNENVRDKGNWKPIDV |
5 | 5njtL | 0.15 | 0.15 | 4.94 | 0.42 | FFAS-3D | | ----RKGRVSKVENSKSPALNKGYNSFKKEHTNVSSPQKRGVCTRVGTMTPKKPNSALRKYARVRLTNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDAGVENRAQGRSKYGTK- |
6 | 2kpyA | 0.35 | 0.14 | 4.16 | 0.31 | HHpred | | ---------PPGATPAPPG--------------AAPPPAAGGSPSPPADGGS----------PPPPADGGSPPVDGG------------------SPPPPST--------------------------- |
7 | 3bogA | 0.24 | 0.15 | 4.60 | 1.13 | MUSTER | | --------------------------CKGADGAHGVGCPGTA-------GAAGSVGGPGCDG-----GHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKG--------GSGTPKGADGAPGAP--- |
8 | 3na6A | 0.31 | 0.07 | 2.11 | 0.39 | CNFpred | | ---------------------------------------------------------------------------------GVHHGFLKLPYSRDDSGSVMIPITVIQNG------------------- |
9 | 3tb8A | 0.24 | 0.22 | 6.78 | 0.64 | HHsearch-2 | | KSSVIGWPAVRRMRRA-EP-------AADGVGAASRDLEKHGAITSSNTAALEAQEEEGFPVTPQVYKALSHFLEGLIHSQGYFPDWQNYTPGPGIRYPLTFGVEEANKGE---NTSLLHPVSLHGLEW |
10 | 3bogA | 0.22 | 0.13 | 4.16 | 1.28 | Neff-PPAS | | ----------------GADGAHGVGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKG------ADGAPGAP----------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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