Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | RENFHGKIPVDKATVLMRRYRNNHRMVAMEIILMKDRDLDEEDKWSLENDTVVRNVVQKLQTEEREQSERDARSSGASDDSKRSKQPKTSKQGTNKDRDIEELGKRLRVLPLTEKNMRMFDHAQKNLMPSVIHQFACETCDQVWWRRVPQRKRVSRCRRCKKKYDPVPPHKMWGIAEFFCLNCSRSFKGFGRMDIGSPCYICRSIILPTQILPPRRNMRDQGPRRRQQHSCLAEDCYNRQEPHVTGTECVHPRSRQKNNKPQVVNPSLPHISSGSTVNTCLSQGSLLEQVYELILDDI |
1 | 4btgA | 0.11 | 0.10 | 3.78 | 0.80 | SPARKS-K | | KADAVGKVPPTAILEQLRTLAPHHITTDFVCHVLSPLGFILPRVGRTATYPNFYALVDCVRASDLRRMLTALSSVDSKMLQ----ATFKAKGALAPALISQHLANAATTAFVVSSVLTILGRLWSPSTPKELD--PSARLRNTYQDMVKQRGRA-EVIFSDEELTIIPWFAMSEVSPFKLRPINETTSYIGQMGQPSHVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAP-IGNTFAVRTAVYEAVSQRGTVNGAEMTLGFPSVVERDYALDRDPMVAIAALRTGI |
2 | 6gylW | 0.14 | 0.07 | 2.40 | 0.65 | FFAS-3D | | ---------KNLLKFVVRGFYGGSFVLVLDAILFHSVLAEDDLKQLLSNKTELGPLIARLRSDR------LISIHKQREYPPNSKSVERVYYYVKYPHAIDAIKWKVH-----QVVQRLKDDLDKN---SEPNGYMCPICLTKYTQLLNFDRTEFLCSLCDEPLVEDDSGKK------------------------------------------------------------------------------------------------------------------------------ |
3 | 6o9lQ | 0.15 | 0.13 | 4.28 | 0.54 | HHpred | | --------ALKRAKYVIRGYGIEHALALDILIR--NSCVKEEDLELLKFDRKLRSVLNNLKGDKFIKC-RMRVETA------ADG---KTTRHINY-RTLVN------VVKYKLDHM-------RRRIETDERDSTN--------------RASFKCPVCSSTFTDLEANQLFDPGTFRCTFCHTEVEEDESANQIEPIYATEDVNLAYEILEPEPTEIPALKQSREAWATKGPSYEDLYTQNVMDDQEDSLEGKSAKERPIWLRESTVQGAYGSEDMKEGGIDDDNEEVMRALLI-- |
4 | 5hamA | 0.12 | 0.10 | 3.46 | 0.80 | MUSTER | | ----DYWYTENEITHLLTAQLDEKKFSVQPAITFRNTALTEEMLKDYTAKGEEKNKILAEVQETIKIANLIPDKEERALMLGDAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNGKEAAVI-EMGYGHWTVLVAKYD---------------KKDNQIILTFNDSL-GNSINYDGQKLPKLIDKTLGNLPNKPII------IDEQTKQQTDQSAC--------------GVFTVDNGIKIAKGQAIL----STEESKGEKG------LRLREHHAQILTDAM |
5 | 3o3xA | 0.11 | 0.04 | 1.33 | 0.59 | CNFpred | | ---------IEAQQHLLQLTVWGIKQLQARILSGG---GWMEWDREINNTSLIHSLIEESQNQQEKNEQELLGGSGGS------GIVQQQNN------LLRAIEAQQHLLQLTVWGIKQLQAR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 3ir9A2 | 0.20 | 0.03 | 0.86 | 0.42 | HHsearch-2 | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AERVTTKCSVCGYENKWTRRWPAAGNCPKCGSSLEVTDVTD------------------------------------------------------------------------------------- |
7 | 5hamA | 0.10 | 0.08 | 2.89 | 1.21 | Neff-PPAS | | -------YTENEITHLLTAQLDEKKFSVQPAITFRNTALTEEMLKDYTAKGEEKNKILAEVQETIKIANLIPDKEERALMLGDAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNGKEAAVIPIEMG---------------------------YGHWTVLVAKYDKKDNQIILTFNDSLGNSINYDGQKLTLGNLPNKPIIIDEQTKQQTDQSACGVFTVDNGIK-IAKGQAILSTEESKG-----------------------EKGLRLREHHAQILTDAM |
8 | 3ir9A2 | 0.20 | 0.03 | 0.86 | 0.50 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AERVTTKCSVCGYENKWTRRWPAAGNCPKCGSSLEVTDVTD------------------------------------------------------------------------------------- |
9 | 6etxG | 0.12 | 0.11 | 3.81 | 0.76 | SP3 | | RHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVV----HQRRSATSSLRRCLLTELP--------------SFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPE--LAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGLY------ALDVLLTRLKSQGH |
10 | 5ugqA | 0.08 | 0.07 | 2.97 | 0.96 | PROSPECTOR2 | | YDRPDGDESGIEAALGVFQTLPKRVHERFDLVGPAIWCNSDADNDRLRAEPQVDYSREGVAHIENETKQFVGRCVDKGKNFLAHVGTVNGAVDPNADPIEAELRQAKGFQDAFNNYAADCAKNAGCPLGADPDPLVDPDNPRISRPARTKDPRGLSYSDAIVGTIALYSPNLWELVDNRGDTLLALADYRRDSHGRYNNSGDARVAINCVDQPPVTDIAPFSYGKFTGDAPLGTCAFWPVPPTSQPHAVSAPDLANQLRGSLLTFDGTQHTVVFQ------GDSCIDEYVTAYLIGGT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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