Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MTSLFAQEIRLSKRHEEILSQRLMLLQQMENKLGDQHTEKASQLQTVETAFKRNLSLLKDIEAAEKSLQTRIHPLPRPEVVSLETRYWASVEEYIPKWEQFLLGRVPYP |
1 | 5tgwA | 0.09 | 0.08 | 3.13 | 0.87 | SPARKS-K | | LRQTGDELVQAFQRLREIFDKLEQVLEEIEELIQKHRQLFDNRQEADTEAAKQGDQWVQLFQRFREAIDKGD--------KDSLEQLLEELEQALQKIRELAEKKN--- |
2 | 6ey4A1 | 0.12 | 0.11 | 3.92 | 0.93 | FFAS-3D | | FQSFGLMNEKFEAANTSSVTTNESLLTSLDQKAAEAKGEFAKAAETAHKVQAASKEFYDYIGTLKTQAVKGFEAMDRGDNIDDYTKKGNEIIAKIEKYKSDIK------ |
3 | 6f1tX2 | 0.16 | 0.12 | 3.96 | 0.31 | HHpred | | --QHIIRLESLQAEIKMLSDRKRE----LEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQ-----LELQEVRLSYRQLQG----------------- |
4 | 5vy9A | 0.12 | 0.12 | 4.22 | 0.82 | MUSTER | | LQLIQVEIKALERDADSTTKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEELTQAKKKLDELENKALDAERRYDTATAADLRYFAIPDIKKQIEKLEDQVAEEERRA |
5 | 1ya9A | 0.13 | 0.12 | 4.17 | 0.56 | CNFpred | | ------VTQELTALMEDTMTEVKAYKKELEEQLGPAEETRARLGKEVQAAQARLGADMEDLRNRLGQYRNEVLGQSTEEIRARLSTHLRKMRKRLMRDAEDLQKRLAVY |
6 | 5h07D | 0.22 | 0.13 | 4.06 | 0.47 | HHsearch-2 | | DCAEVKQELAASRARDAALERVQMLEQQILAYKDDFMSER----ADRERAQSRIQELEEKVASLLHQVS---------------------------------------- |
7 | 1w9rA | 0.08 | 0.08 | 3.22 | 0.85 | Neff-PPAS | | -SHMPEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKA |
8 | 1no4A | 0.21 | 0.13 | 4.08 | 0.49 | HHsearch | | PL---K-----PEEHEDILSERTEALQQLRVNYGSFVSEYNDLTKSHEKLAAEKDDLIVSNSKLFRQIGL--TE--KQE------------------------------ |
9 | 6ey4A1 | 0.10 | 0.09 | 3.42 | 0.72 | SP3 | | FQSFGLMNEKFEAANTSSVTTNESLLTSLDQKAAEAKGEFAKAAETAHKVQAASKEFYDYIGTLKTQAVKGFEVDKETGKMPYEAM------DRGDNIDDWFTGDGYTK |
10 | 2pmsC | 0.18 | 0.17 | 5.67 | 0.62 | PROSPECTOR2 | | GSHMDAEEVAPQAKIAELENQVHRLEQELEAPLQSKLDAKKAKLSKLEELSDKIDELDAEIAKLEDQLK---AAEEEDYFKEGLEKTIAAKKAELEKTEADL-KKAVNE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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