Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | STESLSPTPGPESSRWSLVRARVMEMVEPLVTRTRERWQWFWGPGAVQGFMQTYYEDHLKDLGPRTQAWLQSSRDHLLNKTHSLCPRLLCRDR |
1 | 5j67A3 | 0.14 | 0.12 | 4.03 | 0.78 | SPARKS-K | | ----------VDDNKAEEIADKIYNLYNGYTSEQQMAYNTLMVSASMLFRVQHHYNSHYEKFGD----FVWRSEDELGPRKAHLILRRLERV- |
2 | 1rw6A1 | 0.10 | 0.09 | 3.17 | 0.60 | FFAS-3D | | -----TPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAELPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAM--------- |
3 | 3nawA | 0.17 | 0.14 | 4.61 | 0.33 | HHpred | | --NSNKSDYKMIAD---DQQRKLACVWNPFLDG------WELNAQHVDMIMGSH---VLKDMPLRKQAEILRYANGLIEQAYKTDPQVFGSV- |
4 | 2dbhA | 0.20 | 0.19 | 6.19 | 0.87 | MUSTER | | SGSSGS---SALSRNGSFIKEKKDTVLRQVRLDPCDDMLHFLNPEELRVIEEIQAEDKLDRLFEIIGVKSQEASQTLLDSVYSHLPDLLSGPS |
5 | 4whjA | 0.12 | 0.10 | 3.39 | 0.55 | CNFpred | | -------------------EIIVHQYIQQLVEPALSMLQKAME--IIQQAFINVAKKHFFNLNQTVQSTIEDIKVKHTAKAENMIQLQFRMEQ |
6 | 4woyA | 0.12 | 0.06 | 2.26 | 0.36 | HHsearch-2 | | ---------------------------------------------TFQERLLAFERKHVITHVTLAKQLAGDIALELQAYLRSKFPELPFGAL |
7 | 5yfpE2 | 0.05 | 0.05 | 2.45 | 0.78 | Neff-PPAS | | FENHSVIIETSMQNLINDVETVIKNESKIVKREKATHVIQLFIQRVFAQKIEPRFEVLLRNSLSISNLAYVRILHGLFTLFGKFTKSLIDYFQ |
8 | 2mn4A | 0.15 | 0.10 | 3.27 | 0.42 | HHsearch | | RRGLLTPAELQEVLDLKTPEEQAKKLIDFILKL---------SPADVQARINVLRAQALADKLNK--------------YL-TLE-------- |
9 | 2dbhA | 0.15 | 0.15 | 5.06 | 0.81 | SP3 | | GSSGSSGSSALSRNGSFITKEKKDTVLRQVRLDPFDDMLHFLNPEELRVIEEPQAEDKLDRLFEIIGVKSQEASQTLLDSVYSHLPDLLSGPS |
10 | 2dbhA | 0.15 | 0.15 | 5.06 | 0.53 | PROSPECTOR2 | | GSSGSSGSSALSRNGSFITKEKKDTVLRQVRLDPFDDMLHFLNPEELRVIEEIQAEDKLDRLFEIIGVKSQEASQTLLDSVYSHLPDLLSGSG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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