Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | QAQRLLAQRRPRRPFFESFIRTLIIVCAALAVVLSSVSICDGHWLLAEDRLFGLWHFCTTSNQTRPHCLRDLSQAHVPGLALGMVLARSVSALAVVAAIFGLELLMVSQVCEDLYSRRKWALGSFLLLISFILSFGGLLSFVILLRNQVTLIGFTLMFWCEFTASFLFFLNAISGLHINSITH |
1 | 5vhxE | 0.12 | 0.11 | 3.84 | 1.06 | SPARKS-K | | -------------KTSRRGRALLAVALNLLALLFATTAFLTTYWCQGTRFHTGIWYSCEEGEKCRSF------IDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLHSSDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVHSWDYGWSFCLAWGSFTCCMAASVTTLNSYTK-- |
2 | 5vhxE | 0.14 | 0.11 | 3.93 | 1.27 | FFAS-3D | | ----------------RRGRALLAVALNLLALLFATTAFLTTYWCQGTQRHTGIWYSCEEGEKC-----RSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLHS-SDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLYGWS--FCLAWGSFTCCMAASVTTL------- |
3 | 6qkcI | 0.15 | 0.13 | 4.40 | 0.81 | HHpred | | ------------------VQVLLTTIGAFAAFGLMTIAISTDYWLYTRLTHSGLWRICCLEGLKRGVCVKINHF--AEYLLRVVRASSIFPILSAILLLLGGVCVAASRVYK--SKRNIILGAGILFVAAGLSNIIGVIVYISANAG-KNHYSYGWSFYFGGLSFILAEVIGVLAVNIYI--- |
4 | 6qkcI | 0.16 | 0.14 | 4.56 | 1.48 | MUSTER | | ------------------VQVLLTTIGAFAAFGLMTIAISTDYWLYTRLTHSGLWRICCLEGLKRGVCVKINHFA--EYLLRVVRASSIFPILSAILLLLGGVCVAASRVY--KSKRNIILGAGILFVAAGLSNIIGVIVYISANAGKNHY--YGWSFYFGGLSFILAEVIGVLAVNIYIERS |
5 | 3rkoB | 0.13 | 0.10 | 3.60 | 0.87 | CNFpred | | --------------LMWATLMLLGGAVGKSAQLPLQTWLAD--AMAGPTPVSALIHAAT-------------------MVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQDIKRVLAYSTMSQIGYMFLALGVQA--WDAAIFHLMTHAFFKALLFLASGSVILACHHEQN |
6 | 6qkcI | 0.15 | 0.13 | 4.41 | 1.39 | HHsearch-2 | | ------------------VQVLLTTIGAFAAFGLMTIAISTDYWLYTRLTHSGLWRICCLEGLKRGVCVKINHF--AEYLLRVVRASSIFPILSAILLLLGGVCVAASR---VYKSKRNILGAGILFVAAGLSNIIGVIVYISANAG-KNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERS |
7 | 6qkcI | 0.15 | 0.13 | 4.42 | 1.34 | Neff-PPAS | | ------------------VQVLLTTIGAFAAFGLMTIAISTDYWLYTRGTHSGLWRICCLEGLKRGVCVKINHF--AEYLLRVVRASSIFPILSAILLLLGGVCVAASRVYKS--KRNIILGAGILFVAAGLSNIIGVIVYISANAGKNH-YSYGWSFYFGGLSFILAEVIGVLAVNIYIERS |
8 | 5b2gA2 | 0.15 | 0.13 | 4.23 | 1.66 | HHsearch | | ------------------GLQVMGIALAVLGWLAVMLCCALPMWRVTATIWEGLWMNCVVQSTGQMQCKVYDSLLALPQ---DLQAARALVIISIIVAALGVLLSVVG--D-ESAKAKTMIVAGVVFLLAGLMVIVPVSWTAHNIIQDFYKREMGASLYVGWAASGLLLLGGGLLCC--S--- |
9 | 5kk2E | 0.14 | 0.13 | 4.28 | 0.80 | PROSPECTOR2 | | RGVQML----------------LTTVGAFAAFSLMTIAVGTDYWLYSRGEVMGLWRTC---CNFKGLCKQIDHEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGLCIAASERHNIILSAGIFFVSAGLSNIIGIIVYISANAGYFGALSFIIAEMVGVLA-VHMFIDRHKQLRATARAT |
10 | 6qkcI | 0.15 | 0.12 | 4.03 | 0.47 | SAM | | ------------------------TIGAFAAFGLMTIAISTDYWLYTRLTHSGLWRICCLEGLKRGVCVKINHF--AEYLLRVVRASSIFPILSAILLLLGGVCVAASRVY--KSKRNIILGAGILFVAAGLSNIIGVIVYISANAG-KNHYSYGWSFYFGGLSFILAEVIGV---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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