Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LKKMVDRWRNSHTHCLWQMTLSQRRNPYAILRMQDTMVQELALANKQLLMVRQAALHQLFEKEHQQYQQELNQMGKAFYVER |
1 | 2kubA | 0.09 | 0.09 | 3.21 | 0.91 | SPARKS-K | | LDKMISEAEVLNDMAARKLITLDAEQQLELMKSLVATQSQLEATKNLIGVADLQIAYTTLGNNTQALGNELIKL-------- |
2 | 3nrxA | 0.11 | 0.10 | 3.50 | 0.79 | FFAS-3D | | --EGVQKWEETWRLFLEFERKASRFNLLKEEKQRAKLQKMLPKLEEELKARIELKFMEYVAEQWEMHRLEKER--------- |
3 | 3jct5 | 0.13 | 0.10 | 3.37 | 0.23 | HHpred | | --------------TSWELKKQKRLEDKQFKERLKALKDEKEEARQAKITMLKERREKKEENER--YERLAAKMHA------ |
4 | 2kubA | 0.09 | 0.09 | 3.21 | 1.05 | MUSTER | | LDKMISEAEVLNDMAARKLITLDAEQQLELMKSLVATQSQLEATKNLIGVADLQIAYTTLGNNTQALGNELIKL-------- |
5 | 2j68A | 0.04 | 0.04 | 1.89 | 0.49 | CNFpred | | ARLACNHTREAVARRIPLLEQ-DVNELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLG------- |
6 | 3fxdC | 0.09 | 0.05 | 1.85 | 0.40 | HHsearch-2 | | KETILKALNDAIEKGPWDKSNFLRVIGKKLIAIRDRFLKRIGAA-------------------------------------- |
7 | 2kubA | 0.08 | 0.07 | 2.94 | 0.92 | Neff-PPAS | | LDKMISEAEVLNDMAARKLITLDAEQQLELMKSLVATQSQLEATKNLIGD--PNATVADLQIAYTTLGNNTQALGNELIKL- |
8 | 2e3cA1 | 0.16 | 0.09 | 2.83 | 0.49 | HHsearch | | APALT---------------------KSQTDRLEVLLGKPFRELESELLSRRKKDLQQIYAEER------------------ |
9 | 3ke3A | 0.07 | 0.07 | 2.98 | 0.64 | SP3 | | SAAAIKKVESTESLKQWLTIRAYENGGHAYHATPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGIESVAAE |
10 | 2kubA | 0.09 | 0.09 | 3.21 | 0.53 | PROSPECTOR2 | | LDKMISEAEVLNDMAARKLITLDAEQQLELMKSLVATQSQLEATKNLIGVADLQIAYTTLGNNTQALGNELIKL-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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