Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | METVQELIPLAREMMAQKPNRKLVKLYVLGSVLAFFGVVIGLVETVCSPFTAASRLRDREAAVAELQAARERKVPETQAPLEKGKQQEAVLCSRALSNRLHAS |
1 | 5cwiA1 | 0.13 | 0.13 | 4.41 | 0.87 | SPARKS-K | | ESEAREARSKAEELRQRHPDSQAARDAQKLASQAEEAVKLACELAQEHPNADKAASEAAEAASKAAELAQRHPSQAARDAIKLASQAAEAVKLACELAQEHPN |
2 | 6hftA1 | 0.12 | 0.12 | 4.09 | 0.63 | FFAS-3D | | LKNYRRCIEDCSKALTINPK--NVKCYYRTSKAFFLEEAKSAATFANQRIDPENKSILNMLSVIDRKEQELKAKEEKQQREAQERENKKIMLESAMTLR---- |
3 | 3u84A1 | 0.15 | 0.13 | 4.22 | 0.27 | HHpred | | LRSIDDVVRLFAAELGR-----------EEPDLVLLSLVLGFVEHFLAVNRVIPTNDLSIIALYARFTAQIRVSSRSDVIWNS--------LSRSFKDRAHIQ |
4 | 1w9rA | 0.13 | 0.13 | 4.41 | 0.84 | MUSTER | | VEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEK |
5 | 4dlpA | 0.14 | 0.07 | 2.33 | 0.53 | CNFpred | | LGAIFAVVAEANRYFAGQEPWALRMGTVLYVTAEVLRRVGIMVQPFIPQSA---------------------------------------------------- |
6 | 5f1cA | 0.24 | 0.11 | 3.33 | 0.34 | HHsearch-2 | | HDRIGDMVDYPKYY-NE-KERSLVKAYGIGSGLGLMVVATVLCDLVVL------------------------------------------------------- |
7 | 5cwpA1 | 0.14 | 0.14 | 4.67 | 0.85 | Neff-PPAS | | EEEARELIERAKEAAERAQEERTGDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQ |
8 | 2klvA | 0.16 | 0.07 | 2.26 | 0.38 | HHsearch | | --GVIDTSAVESAITDGQGDMKAIGGYIVGALLAVAGLIYSMLRKA--------------------------------------------------------- |
9 | 2jbwB | 0.10 | 0.10 | 3.56 | 0.59 | SP3 | | AGDYEKYTSAVVDLLTKLEAIRNDAIGVLGGNYALKSAACACI--SWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALET----RDVLSQIACP |
10 | 5cwiA1 | 0.13 | 0.13 | 4.41 | 0.56 | PROSPECTOR2 | | ESEAREARSKAEELRQRHPDSQAARDAQKLASQAEEAVKLACELAQEHPNADIAKLCIKAASEAAEAASKAADSQAARDAIKLASQAAEAVKLACELAQEHPN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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