>PF15100 (244 residues) ALCHVAVASCLCLATVYTGVFDGVFVQVGYEHYAETPVASLPAFLAMPFNSLINVAYVLL GVYWLQRNASTPERSAEMQRARYLKDVFAAMALVYGPVQWLRIGTQTRPAAVLDQWFTLP IFAWPVAWCLYLDRGWKPRLLLAIECLSLCSYGLALLHPCGFEVALGAHIAAAVGQALRA HGRYGSVCSGVYLALAVLSCLGFVVLKLCDHQLSRWHLFQRLTGHFWSKVCDVLQFHFAF LFLT |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | ALCHVAVASCLCLATVYTGVFDGVFVQVGYEHYAETPVASLPAFLAMPFNSLINVAYVLLGVYWLQRNASTPERSAEMQRARYLKDVFAAMALVYGPVQWLRIGTQTRPAAVLDQWFTLPIFAWPVAWCLYLDRGWKPRLLLAIECLSLCSYGLALLHPCGFEVALGAHIAAAVGQALRAHGRYGSVCSGVYLALAVLSCLGFVVLKLCDHQLSRWHLFQRLTGHFWSKVCDVLQFHFAFLFLT | |||||||||||||||||||
1 | 6oh2A | 0.10 | 0.09 | 3.36 | 0.94 | SPARKS-K | LTVMTLVAAAYTVALRYTRTTAE------------------ELYFSTTAVCITEVIKLLISVGLLAKETGSLGRFKASLSENVELAKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRTLSKLQWISVFMLCGGVTLVQWKPAVAIAIAVLCSGFAGVYFEKVLKSSDTSLWVRNIQMYLSGIVVTLAGTYLSDGAEIQEKLASVGGLYTSVVVKYNIMKGFSAAAA | |||||||||||||
2 | 3mktA | 0.13 | 0.12 | 4.28 | 0.90 | FFAS-3D | -LIKLATPVLIAVAQTGMGFVDTIMA----GGVSAIDMA--AVSIAASIWLPSILFGVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMMVIGFIGLLLNIPLNWIELGGVGCGVATAIVYWIMLLLLLFYIVTSRLGFPVAAALFFEVTLFAVVALLSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRV--- | |||||||||||||
3 | 2yzsB2 | 0.17 | 0.09 | 3.09 | 0.39 | HHpred | ----------EFRKLCYKKLEE-VT-GWELEKRTKRPPQ-------NPLNALISFGNSLTYAKVLGEYKTQPTVSYLHEPS-RFSLSLDVAEVFKPIFNLIRLIQENKID---KTHFSLGRKVFLKAFNELLERKVSHRTLIKLELYKLIKHLLE----------------------------------------------------------------------------------------- | |||||||||||||
4 | 3wajA1 | 0.10 | 0.10 | 3.75 | 0.80 | MUSTER | GFNDHHIWEAFWQVSALGTFLLAYNRWKGHDLTARQMAYPVIAGITIGAGFIIAPIILAFMFFAFVLAGFV--NADRKNLSLVAVVTFAVSALIYLPFIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVGFFERVGLGRKGMPLAVIVLTALIMGLFFVLTNAVLHFGALFFFGMAGILYSAYRFLKRRSFPEMALLIWAIAMFIALWGQNRFAY-AAVSAVYSALALSVVFDKL-AFALLIALA | |||||||||||||
5 | 3rkoB | 0.13 | 0.11 | 3.98 | 1.19 | CNFpred | LLMYLGWEGVGLCSYLLIGFYYTDPK-------------NGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFLMWATLMLLGGAVGKSAQLP---LQTWLADAMAGPTPVSALIHAA---------TMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQ--TDIKRVLAYSTMSQIGYMFLALGV--QAWDAAIFHLMTHAFFKALLFLASGSVILACH | |||||||||||||
6 | 6ffvA | 0.16 | 0.11 | 3.70 | 0.52 | HHsearch-2 | NLQQIAIGFVLVLMMLLTR----------SHHWASLPDASWAIFFRWVVPALIA---ASVVIDYVAITWGGVS--DFCVSPAYWLLIPA-----YLALFAGGRFYARGHS---LSLLGLFRLAGVALAVV-----------AVAQLLTTGGFYFSGRFA---DPT-------LAGLVLRLEKYFPPMTFALYVGLAATVHVALAAV-------FRRRHHHHHHHH------------------- | |||||||||||||
7 | 6oh2A | 0.09 | 0.09 | 3.27 | 0.84 | Neff-PPAS | CLTVMTLVAAAYTVALRYTRTTA--------------EELYFSTTAVCITEVIKLLISVGLLAKETGSLGRFKASLSENVSPKELAKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRTLSKLQWISVFMLCGGVTLVQWKLLGFGAIAIAVLCSGFAGVYFEKVLKSSDTSLWVRNIQMYLSGIVVTLAGTYLSDGAEIQEKGFFYGYTYYVWFVIFLASVGGLYT | |||||||||||||
8 | 1r3dA1 | 0.25 | 0.07 | 2.29 | 0.46 | HHsearch | ------------------------------------------------------------------------LQENEEKAARWQHD-----------QQWAQRFSQQPIEHVLSDWYQQAVFSSL-----------NHEQR----------------------------------QTLIAQRSANLGSS---VAH--LLATS----------L----------AK------------------- | |||||||||||||
9 | 6idpA2 | 0.10 | 0.09 | 3.18 | 0.76 | SP3 | ALGHIMGPAMLSQLLPPLSMFATKLL----ASFGTAAVA--AWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAKEITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVPISLG--ALGICMLMVSVANALGKSYV---ALTISALRLFAFYLPCLWLGAHFYGIEGLFIGALVGNIIAGWAAWLAYQ-KALRSENLYFQ----------------------- | |||||||||||||
10 | 5cwmA | 0.10 | 0.09 | 3.46 | 0.98 | PROSPECTOR2 | DPEDELKRVEKLVKEAE-------------ELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGD--------PEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVEVVRVAELLLRIAKESGSEEALALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRER | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |