Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | NPGASLDGRPGDRVNLSCVGVSHPIRWVWAPSFPACKGLSKGRRPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVLHVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRFAPLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPRRLSTADPADASTIYAVVV |
1 | 1dn0D1 | 0.15 | 0.07 | 2.39 | 1.22 | FFAS-3D | | ---GAGLLKPSETLSLTCAVYGGSFSWIRQPP---------GKGLEWIGEINHSGSTNYNPSLKSRSVDTSKNQFSLKLSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSS------------------------------------------------------------------------------------------------------------ |
2 | 2ocwA2 | 0.12 | 0.11 | 3.92 | 1.09 | Neff-PPAS | | -SPTVVKGVAGSSVAVLCPYNRKESKS----IKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNLTSRDAGFYWCLTNGDTLWTVEIKIIEGEPNLKVPGNVTAVLGETLK---VPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCERKAAGSRDVSLAKADAAPD------EKVLDSGFREIENKAIQDPR------- |
3 | 1bwmA | 0.09 | 0.08 | 3.03 | 1.04 | PROSPECTOR2 | | ASPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLI------HYSYGAGSTEKGDIPDGYKASRPSQENFSLILEATPSQTSVYFCASGGQGRAEQGTRLTVLGSDYKDDDDKRSGGGG--------------------------SGGGGSGGSGAQQQVRQSPQSLSYEDSTFDYFPFPGKSPALLIAISLVSNKKEDGRFTIFFNKREKKLLAVSPY |
4 | 5viyH | 0.10 | 0.09 | 3.27 | 0.86 | SPARKS-K | | VESGGGLVPPGRSLRLSCSASFPDYAMAWVRQAP-----GQGLQWVGFMRGAYGGSAQFAAFAVGKSRDDGRNVVYLDVKPTFEDTGVYFCAREQRNKDYRY---GQEGFGYSYGMDVWGRGTTVVVS---------------------TASTKGPSVFPLAPTAAPEPVTVSWNSGALTSGVHTFPAVLQLYSLSSVVTVPSSSLQTKPSNTKVDKRVEP--- |
5 | 5b3nA1 | 0.17 | 0.08 | 2.63 | 1.21 | FFAS-3D | | ---GGGLVKPGGSLKLSCAASGFTMSWVRQTPEKR--------LEWVATISSGGSYTYYPNTVKGRFTDNAKNTLYLQMSLRSEDTAIYYCARHGVRHRVDYFDYWGQGTTLTVS------------------------------------------------------------------------------------------------------------- |
6 | 6ddeE | 0.15 | 0.13 | 4.35 | 0.76 | HHpred | | -ESGGGLVQPGGSRKLSCSASGFSFGMHWVR-------QAPEKGLEWVAYISSGSGIYYADTVKGRFTISPKNTLFLQMTLRSEDTAMYYCVRSIYYGQGTTLTVSSSDIVMTQATSTPGES--VSISCRSSKSLLHSNGNTYLYWFLQR-PGQSP-----QLLIYRM--SN-----------LASGVPDRFS-GSGSGT--AFTLTISRLEAEDVGVYYCMQH |
7 | 3he6D | 0.14 | 0.13 | 4.45 | 0.92 | MUSTER | | QSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDT-------GHGLRLIHYSYGAGSTEKGDI-PDGYKASRPSQENFSLILTPSQTSVYFCASGDAQGPGTRLTVLEDLKNVFPPEVAVFE--PSEAEISHTQKATLVCLATGFYPDHVEWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTIVSAEAW |
8 | 5j74A | 0.16 | 0.07 | 2.37 | 0.68 | CNFpred | | VESEAEVKKPGSSVKVSCKASG-SYAISWVRQAP-------QGLEWMGGTIPIFGTADYAQEFQGRVTITTDSTAYMELSGRSEDTAVYYCVLLGTTTGHYFDYWGQ--------------------------------------------------------------------------------------------------------------------- |
9 | 5acoG | 0.16 | 0.07 | 2.38 | 0.30 | HHsearch-2 | | QESGPTLVEASETLSLTCAVSGDSSFWGWVR---QPP----GKGLEWVGSLYWNRGTYHNPSLKSRLTDTPKNLVFLKLNVTAADTATYYCARF------GGEVDLWGR--GTLVTV----------------------------------------------------------------------------------------------------------- |
10 | 6e5p2 | 0.12 | 0.10 | 3.62 | 1.07 | Neff-PPAS | | --SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHMRVEDTAIYYCARKGSDRL---------SDNDPFDAWGPGTV----------------------VTVSPASTKGPSVFPLAPSSKSTSGGTNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTNHKPSNTKVDKKVE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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