Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | EQGFVLDSIAVSNISKDYSKAQPKLGPAIPPYNSQKDKNADSYFKFQWAPTVLKRSKQDKGGTSIEGPVIDRFHTYGGGHQYLSKRNQFGAGHSRELVDGHAQFMSDVKAMNGYHGPFGFRRNTPELRTRPSPF |
1 | 5yfpE5 | 0.06 | 0.05 | 2.30 | 0.93 | SPARKS-K | | --------KKKDFVPKSQELLDQDLNLIFEQSSKFLKGKNLQTFLTLIGEELYGLLL--SHYSHFQVNSIGGVVVTKDIIGYQTAIEDWGVASLIDKFATLRELAELLELTKEIGRDIIQS-----YISNREDF |
2 | 3cz6A | 0.15 | 0.13 | 4.53 | 0.39 | FFAS-3D | | RSDF--------SNEDIYDNIDPD-TISFPPKIATTDLFLPLFFHFGSFDKLHEVISGDYEPSQAEKLVQDLCDETGIRKNFSTSILTCLSG-DLVFPRYFLNFKDNVNPPPNVPGIWT-HDDDESLKSNDQ-- |
3 | 3bcvA | 0.22 | 0.12 | 3.76 | 0.35 | HHpred | | --------------------LIPKVSVIVPIYNVEK--YLD-----QCVQALLAQTLSDDESPDNCPKICDDYAAQYPNIKVIHKKN-AGLG-ACNSATGE--------------------------------- |
4 | 3m8wA | 0.17 | 0.16 | 5.40 | 0.84 | MUSTER | | EEVVPLDELICKIARELTLDEKYMVGRVIAPGNFTRTPNRHDYALKPFGRTVMNELKDSDYDVIAIGKISDIYDGEGVTESLRTKSNMDGMDKLVDTLNMDFT----FLNLVDFDALFGHRRDPQGYGEA-QEY |
5 | 3gbtA | 0.09 | 0.04 | 1.41 | 0.51 | CNFpred | | ---GKIAAISWSSQMHSLIGLGELLTNSITWADNCAKSIVQDAKNRGFAQQIYRKTG----------------------------------------------------------------------------- |
6 | 2pffB | 0.22 | 0.22 | 7.04 | 0.65 | HHsearch-2 | | ENDTIKNYITARIMAKFDKKSNSALFRAVGEGNAQLVAIFDDYFTYHVVGDLIKFTTLDTQGLNILEWLENYLLTQEQVQDYVNKTNSLPAGEISLVNGAKNLVVSGPQSLYGLNAPFSERKLKFSNRFVASPF |
7 | 5mruA | 0.10 | 0.10 | 3.59 | 0.75 | Neff-PPAS | | -KRALLDALAEAMLAENHSTSVPRDDDWRSFLTGNARSFRQALLAYRDGARIHAGTRPGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSESGEEAGPDAAFGLAVIVDGLAKRR--- |
8 | 3bcvA | 0.23 | 0.18 | 5.61 | 0.50 | HHsearch | | --------------------LIPKVSVIVPIYNVEK--YLD-----QCVQALLAQTLSDDESPDNCPKICDDYAAQYPNIKVIHKKN-AGLG-ACNSATGEYVAFSDDYVDSDYTAVFTFKKNKNEIKDLASD- |
9 | 5gp9A2 | 0.11 | 0.09 | 3.23 | 0.60 | SP3 | | EKILVNM--HFKQLAADHKLAI-VTQLELRQSNTELRLKINEVLKGNLLDELLME-GKEKGYFFQELDTRLAQMIFGTLDEVVTNWVMKDCKYDLTALV--KPVHQLL--LGGLRHR----------------- |
10 | 1jvr | 0.11 | 0.10 | 3.54 | 0.60 | PROSPECTOR2 | | HMGQI-------HGLSPTPIPKAPRGLSLQPGPSDFDFQQLRRF----LKLALKTPIWLNPIDYSLLASLIPKGYPGRVVEIINILVKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVETTTQCF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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