Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KKKCDVGLDRGPHIVLWTIICLPIIFIVSFVVSFYYGTITWYNIFLVYNEERTFWHKITFCPFLIIFYPIIIMVVSFSLGLYSAVTQVSWSFGDWWHAVRDMEKGFCGWLCSKLGLEDCSPYSIVELLDS |
1 | 1gakA | 0.07 | 0.07 | 2.82 | 0.94 | SPARKS-K | | FDDVVV---SRQEQSYVQRGMVNFLDEEMHKLVKRFRDMGFVFLLKKVNRERMMRY----CMDYARYSKKILQLTLTKMGRFVGYRNYGVIRELYADVFRDVQGFRGPKMTAAMRKYSSKDPGTFPCKNE |
2 | 5vreA | 0.15 | 0.10 | 3.38 | 0.71 | FFAS-3D | | ----------GVFAIAITLLVLEIPSYLAFLTSFASILVMWVNHHRIFSLVARTDHAFFYWNGLLLMLPFPTALLAVAASVYAGIFLAIAIVFNRLWKH------------------------------- |
3 | 6hcyC | 0.13 | 0.10 | 3.45 | 0.38 | HHpred | | ---------------LFPMWRFPFYLSAVLCVFLFFYCVIRDVIYPYVYEKKDNTFRMAISIPNR-IFPIALTLLAYLPGVIAAILQLYRGLDHWMLCRKQ--LGLVALGFAFLH--------------- |
4 | 5unfA3 | 0.16 | 0.15 | 4.85 | 0.84 | MUSTER | | PPEKYAQWSA---GIALMKNILGFIIPLIFIATCYFGIRKHLLKTNSYGKNRITRDQVLKMAAAVVLAFIICWLPFHVLTFLDALAWMGVINSCEVIAVIDLALPFAILLGFT-----C-PY----FVGN |
5 | 6f34A | 0.11 | 0.08 | 3.08 | 0.88 | CNFpred | | -----------TMLGIGAIIGTGIFVLTGVAAAEHAGPALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLL---------------- |
6 | 4chvA | 0.09 | 0.09 | 3.49 | 0.39 | HHsearch-2 | | VWLLKPRDSTFFPVLGRVLANANIGVTTLFGVVLFAVALAAYVIERDIQPEKSMWWAGDTIPQSFAGRVLAGAVMMSGAGILATGFYQEVRVRNWVALFQKLGPAVLVEIVRALRARTVPAGAVICRIGE |
7 | 3o7pA2 | 0.06 | 0.06 | 2.63 | 0.78 | Neff-PPAS | | ----QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDA |
8 | 1yvlB4 | 0.26 | 0.12 | 3.56 | 0.56 | HHsearch | | KEETQLC-QPGLVIDLET-TSLPVVVISNVSLPSGWASILWYNMLV--AEPRNLS--FFLTPPC------------------------------------------------------------------ |
9 | 6a2jA3 | 0.17 | 0.14 | 4.55 | 0.94 | SP3 | | ------PLQIGKKMQFHMIGILIYSYIVVLLLFVWIIVAAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYSELALGFALAHSFFIACLFGVLCYFLLLIARFRYES------------------ |
10 | 2asr | 0.09 | 0.08 | 2.91 | 0.53 | PROSPECTOR2 | | KS------------FVVSNQLREQQGELTSTWDLMLQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFATSRNIDEKYKNYYTALTAMGERFAQYALSSEKLYR----------DI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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