Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LTSLGLLCLVSLLLALLSLVFLLKISPMTTADMRDLRRTEQLTIISADEYVVVYEVTLALCALTLSLNLCCLLVCAIQFLFAVKLVKSPQGGQRTNKYLQKSSITRVCAVGGFFISIPVFLTGIILYTFIQFHSTPAIVTSVFIGLGIIFCGCAMVHNVFVWQKEKTNAVR |
1 | 4hkrA | 0.12 | 0.09 | 3.27 | 1.16 | FFAS-3D | | -AKLKASSKTSALLSGFAMVAMVEVQ--------------------------MLIAFAICTTLLVAVHMLALMISTC---------ILPNPHERLHWYIETA------WAFSTLLGLILFLLEIAILCWVKFYDLSRRAAWSATVVLIPVMIIFMAFAIHFYRSLVSHKY- |
2 | 4av3A | 0.10 | 0.09 | 3.48 | 1.00 | CNFpred | | YQGGSVMGLSVGGFALLGLVLVYLIFGKWMGQVDNLNIYTN--------GINFVPFAMTVSGYALGCSIIAMFDRVGGGVYTKAADMAATIADNVGDNVGDVAGLGADLLESFVGAIVSSIILASYMFPIYVQQVPKETIQALISYPIFFALVGLGCSMLGILYVIVKKPS |
3 | 4hkrA | 0.19 | 0.14 | 4.54 | 1.37 | HHsearch-2 | | RAKLKASSKTSALLSGFAMVAMVEVQ--------------------------MLIAFAICTTLLVAVHMLALMIST--CIL-------PNPHERLHWYIETAW-----AFS-TLLGLILFLLEIAILCWVKFYDLSAWSATVVIPVMIIFMAFAI-HFYRSLVSHKYEVRE |
4 | 4hkrA | 0.19 | 0.14 | 4.54 | 1.23 | HHsearch | | RAKLKASSKTSALLSGFAMVAMVEVQ--------------------------MLIAFAICTTLLVAVHMLALMIST--CIL-------PNPHERLHWYIETAW-----AFS-TLLGLILFLLEIAILCWVKFYDLSAWSATVVIPVMIIFMAFAI-HFYRSLVSHKYEVR- |
5 | 5i6xA | 0.09 | 0.08 | 3.16 | 0.93 | SPARKS-K | | YQDALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIAIIFFLMLITLGLDSSFAGLEGVITAVLDEFPHVWAK-----RRERFVLAVVITCFFGSLVLTFGGAYVVKLLEEYA----TGPAVLTVALIEAVAVSITQFCRDVKEMLGFSP |
6 | 5xjjA2 | 0.10 | 0.09 | 3.43 | 1.08 | FFAS-3D | | -LETSVLSICLTTETLHYVISSVAAAVSTRVSNNLGAGN-------------PQVARVSVLAGLCLWLVESAFFSILLFTFRNIIGYAFSNSKEVVDYVAD--LSPLLCLSFILDGFTAVLNGVANNIFSYYLVGAPVGKGLWCGVVIGSTVQATVLAIVTWKEQAEKARK |
7 | 4hkrA | 0.19 | 0.14 | 4.53 | 0.54 | HHpred | | --KLKASSKTSALLSGFAMVAMVEVQ--------------------------MLIAFAICTTLLVAVHMLALMIST--CIL-------PNPHERLHWYI-ETAW----AF-STLLGLILFLLEIAILCWVKFYDLSAWSATVVIPVMIIFMAFAIYRSLVSHKYEVTVS-- |
8 | 6bhpA | 0.10 | 0.09 | 3.47 | 0.85 | MUSTER | | LVISQLLTLAAYVVVTAGAALLQKKANTLTLFDTQEGIDKYTPVYKEVFTAT--TYIIAYPQQPQYQFQYQWWIIQFELFVFLLTAACTVFPSIIKRMRPVALTFIASALVLVMDNINAIFFLLRNETAKAVFD---DYRIATAQAGLIMVGVANGLTIFFLGSYD----- |
9 | 5gpjA | 0.07 | 0.06 | 2.46 | 1.00 | CNFpred | | FRSGAVMGFLLAANGLLVLYIAINLF-------------------KIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGAD-PRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNELTAMLYPLIVSSVGILVCLLTTLFATDFFEI |
10 | 5mg3D | 0.14 | 0.13 | 4.36 | 0.58 | HHsearch-2 | | GMQNIEQGLEACLAGLLVSILFMIIFYKKFGL------------IA--TSALIANLILIVGIMSLLLSMPGIAGIVLTLAVAVDANVL--INERIKEELSNGRTVQQAIDEGYDANITTLIKVIILYA---VGTGAIKGFAITTGIGVMFTAIVGTRAIVNLLYGGKRVKK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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