Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SFSRKNMSQKLSLLLLVFGFIWGLMLLRYTFQHPRHQSSAELREQILDLSKRYVKALAEENKNTMNGGNGASMAGYADLKRTIAVLLDDILQRLVKLENKVDYIVVNGSATNTTNGTSGNLVPVTSSKRVNAASN |
1 | 1jigA | 0.15 | 0.14 | 4.76 | 0.67 | SPARKS-K | | --STKTNVVEVLNKQVANWNVLYVKLHNYHWYVTGPHTLHEKFEEFYNEAGTYIDELAERILATSSVNEGTSKESAEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSADMLLAIHTTLEQHVWMLSAFLK--- |
2 | 1jigA | 0.17 | 0.13 | 4.13 | 0.74 | FFAS-3D | | --TKTNVVEVLNKQVAWNVLYVKLHNYHWYVTGPHFFTLHEKFEEFYNEAGTYIDELAER-ILALEGKPLATMKEYLSAEEMVQTLVNDYSALIQELKEGME--------------------------------- |
3 | 1t7sA | 0.10 | 0.06 | 2.19 | 0.24 | HHpred | | --------------------------LERGFLEKQVE-GKKLEKKVKYFNEEAERHLETLDGNIITETTPEQAKRNREKRKTLVNGIQTLLNQNDALLRRLQEYQ-S---------------------------- |
4 | 1wp9A | 0.16 | 0.16 | 5.19 | 0.66 | MUSTER | | EWVRVDLPEIYKEVRKLLREMLRDALKPLAETGLLESSSPDIKKEVLRAGQIINEEMAKGNHDLR--GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAISLLVQAKEI |
5 | 4ozwA | 0.11 | 0.08 | 2.91 | 0.57 | CNFpred | | --------GKSMRKWALGSLSGAYMRLKFSS-SRPLAAHAEQSREIEDWFARLGTQVVRDWSGLPLKKINNASYWAAWSVMSTAVVTNRFDWAVSEFKVAANQVD------------------------------ |
6 | 6bq1A | 0.19 | 0.17 | 5.48 | 0.49 | HHsearch-2 | | SMNRHVAAIGPRFKLLTLGLS----LLHADVV-PNATIRNVLREKIYSTAIKFWTAMFSDKKR-----GSQLHKYYMKRRTLLLSLLATEIERLITWYNPLSAPELELDQAGEN------SVANWRSKYISLSEK |
7 | 4z9hA | 0.09 | 0.09 | 3.40 | 0.71 | Neff-PPAS | | NQLREQQGELTSTWDLMLQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFKSMAPPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNALSSEKLYRDIVTDNADDYR |
8 | 4pndA | 0.17 | 0.04 | 1.22 | 0.35 | HHsearch | | --------------------------------------------------------------------------------GNILQKIENILKKIENILWKIENILQKIEG------------------------- |
9 | 6f0kH | 0.09 | 0.09 | 3.40 | 0.57 | SP3 | | ALTLAQIEAASEQVAQDLEQALAELEALRLLRDETLAPYVAQYEAILEAHQQAVLEFEHWKEQVAAHPYRRANRTLGAITARHEALLQQYADVAWAVAQHVNPALLARAYTSSGPRFFFYVVPPQYARQVNEQAV |
10 | 6f0kH | 0.11 | 0.11 | 4.00 | 0.69 | PROSPECTOR2 | | VALTLAQIEAASEQVAQDLEQALAELEALRLLARRDETLAPYVAQYEAILEAHQQAVLEEQVAAHPGDYRRANRTLGAITARHEALLQQYADVAWAVAQHVNPALLARAYTSSGPRFFFYVVPEQAVPPLQVVAQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|