>PF15014 (303 residues) QEWPVPYRRFDHRPKPDPYCRALYTFCPTGLPDGTIPTMKDSDTIQVFRLQAPVWEFKYG DLLGKFDIMHDAIGFRSTLTGRNYTMEWYELFQLGNCTFPHLRPELSAPFWCNHGAACFY EGIDDLHWKQYGTLEKVAEITGTQFNKMSEWVKQDNETGIYYETWTVQADPSPNTTVWFE SYDCSKFVHRTYRKLADMGVTLKSTLQTNYTRIFLYSGQPSFLGNDTTIFGDGGVKSLAS DIRSFFHSFQPHQSIKDFLLSLLEVYDRVVLEKSFYLYYNFEYWHLPMKPPYIRVTYEEI PLP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | QEWPVPYRRFDHRPKPDPYCRALYTFCPTGLPDGTIPTMKDSDTIQVFRLQAPVWEFKYGDLLGKFDIMHDAIGFRSTLTGRNYTMEWYELFQLGNCTFPHLRPELSAPFWCNHGAACFYEGIDDLHWKQYGTLEKVAEITGTQFNKMSEWVKQDNETGIYYETWTVQADPSPNTTVWFESYDCSKFVHRTYRKLADMGVTLKSTLQTNYTRIFLYSGQPSFLGNDTTIFGDGGVKSLASDIRSFFHSFQPHQSIKDFLLSLLEVYDRVVLEKSFYLYYNFEYWHLPMKPPYIRVTYEEIPLP | |||||||||||||||||||
1 | 4r04A4 | 0.09 | 0.08 | 3.11 | 0.59 | SPARKS-K | NKNTAL---------DKNYLLNNK------IPSNNVEEAGSKNYVHYIIQLQ--GDDISYEATCNLFSKNNSIIIQRNMNESAKSYFLSSILELNKYRIPERLKNKEKVKVTFIG-----------HGKDEFNTSEFARLSVDSLSNEISSFLDTIKLDISPKNVEVNLLYDFN----VEETYPGKLLLSIMDKITSTLPDVNK----NSITIGANQYEVRINSEGRKAHSGKWINKEEAIMSDLSSKLKAKSKNIPGLASISEDIKTLLLDASVSPDTKFILNNLKLNIESSIGDYIYYEK- | |||||||||||||
2 | 1dq3A2 | 0.08 | 0.05 | 1.85 | 0.59 | FFAS-3D | -----------------------------------MPD--GEDY------KFIFDYWLAGFIAGD-----GCFDKYHSHEYIYDRLRIYDYRIETFEIINDYLEKTFGR---------------KYSIQKDRNIYYIDIKARNITSHYLKLLEGIDNGIPPQILFDAEGHVSNKPGIELGMVN-KRLIEDVTHYLNALGARIREKLRKDGIDYVLHVEE-------------------YSSLLRFYELIGKNLQNEEKREKLEKVLS------------------------------------ | |||||||||||||
3 | 2d0cA1 | 0.07 | 0.02 | 0.67 | 0.23 | HHpred | -------------------------------------------------------------------------------------------------------------------------------------SNYVIQADQQLLDALRAHYEGALDRLPAGALFAVKRPDVRSGKVLFQGKAAEQEAAKWISGASASNET------------------------------------------------------------------------------------------------------ | |||||||||||||
4 | 4es8A | 0.10 | 0.09 | 3.39 | 0.57 | MUSTER | GTWEVSADGSSGRKGATDSYVFHLIPAKDVKKPGWREHNEVKD--SYIKIDKQSIAARYKTSTT--APYSVAFKVNTKIKDHDYKITFEQGQIASGITV-SAFNKTTDDSFKKYASNVKIEGEEQGF-REQGTISFRTLKEGPMSLVLLSKVEKKPQGDLEFKNLKIIDVTNPSQLDKGVAYVGNKNVQLTLK-------SDDGRTNFEGDEISLFNSRGELLQTVTVTKDQQNPISITLS----EDQAKSLKNKEKLKVSIKQ--------KQSKKTSKDFFFEVGID-PKVEAK------- | |||||||||||||
5 | 3wiqA | 0.13 | 0.09 | 2.96 | 0.64 | CNFpred | -------------------------------------------EILEFKRVLDLK----------QGILYRKLRLKDV-KGRITTIEGFRFVSMNNK-----------NLIVQKYDVVCEN---------SAVLNVESFIDATTVNSKDV-----NDRVKHYEIDKKKDF---ADGIYLGITT-YKVGIASSTKVLLNNQRCYFNRFTITENFEVEAKERYEIEKLTVLVSS-NVGDVFETCTNKLKEFET-KSAEKLLFEHIEEYKRLWDVANIDIVG------------------------ | |||||||||||||
6 | 3vn5A1 | 0.10 | 0.02 | 0.73 | 0.49 | HHsearch-2 | ---------------------------------------------------------------------------------------------------------------------------------------PSLKISPSEAEKIQNYLVSFRKINAPYTLWALEGNGVKTGSLLIQGKNSEKVLKEVLNLL------------------------------------------------------------------------------------------------------------ | |||||||||||||
7 | 4r04A4 | 0.10 | 0.08 | 3.05 | 0.63 | Neff-PPAS | NKN--------TALDKNYLLNNKIPSNNVEEAG------SKNYVHYIIQLQGDDISYEATCNLFSKNPKNSIIIQRNMNESAKSYFLSDDILELNKYRIPERLKNKEKVKVTFIG-----------HGKDEFNTSEFARLSVDSLSNEISSFLDTIKLDISPKNVEVNLLYDFNVE--------ETYPGKLLLSIMDKITSTLPDVNKNSITIGANQYEVRINSDNKLKAKSKNIPGLASISEDIKTLLLDASVSPDTKFILNNLKLNIESSIGDYIYYEK---------------------- | |||||||||||||
8 | 3qwxX2 | 0.08 | 0.02 | 0.65 | 0.20 | HHsearch | ------------KKPIIEVVVGTFKFTGER---ETDLPFEQGERLEILSKTNQDW--WEARNA------LGTTGLVPAN----Y-------------VQIQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 3jb6B | 0.10 | 0.10 | 3.54 | 0.57 | SP3 | AYTQPHIIPTQGIADSDTYLRSYFPFELTASNLAAPQKYNLSPMTRSIFNNTGREDAVIRKLYGYGEYYEGCLITWTGIYGE-----VTMMVNLSKRDLGLDVGDDYLKEYKKLLFYGVITDAIPSGISARSTIMKISPHSGGALAVLSKFLEAVVSTNVINATLVVYAEKGAG---------KTSFLSTYAEQLSLAGQVVGHLSSDAYAKNKDVEEPSFAYDYVLSLDTDDNESYYEQKASELLISHGSVRKKIKMMDEMNEVLIAQLENADTHSERNFYMVSTGKTTPRTLINAQDATIA | |||||||||||||
10 | 5uvgA | 0.06 | 0.06 | 2.44 | 0.82 | PROSPECTOR2 | GKLPDSLARVNNLFNTQARAKERNGAARPQIKIYIDSPHPDEAFDHEVSAFFPADKRAATKLKEQLHGYYILYDVGVYGCLNSGLLFASRYPIMDVAYHCYPNKCNDDALASKGALFLKVQ-----VGSTPQDQRIVGYIALDLLQDWLADFRKSTSSPEELVAFDVVFDNCS----------------SDDKLEQQHSLHYRDPCRLGPGEEKPWAIGTLLDTNDVCTPDNLQKVLESEEGRREYLAFPTSKSSGQKGRKELLKGNGREGLCPDWKAEVEEFSFITQLSGLMRLMVSS---G | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |