>PF14996 (145 residues) DGLINEIFEEPCFHRNPVKLKSKSSNNTSVRTSIQMLGKRCSPVYLGGSSAPCGIGTNTS QSRTCDQLRCTACDFRVLSFDDYMWDKSCDYLFFRNNMPEFSKLKAKMIKQKGTRAYACQ CSWRDIKELTDLRTDQQLRWVCGKH |
|
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | DGLINEIFEEPCFHRNPVKLKSKSSNNTSVRTSIQMLGKRCSPVYLGGSSAPCGIGTNTSQSRTCDQLRCTACDFRVLSFDDYMWDKSCDYLFFRNNMPEFSKLKAKMIKQKGTRAYACQCSWRDIKELTDLRTDQQLRWVCGKH | |||||||||||||||||||
1 | 4nyqA | 0.10 | 0.09 | 3.30 | 0.70 | SPARKS-K | GKWYLRTTSPDIFKQVSNSAHGNDYYGTVTDYSPE-YGLEAHRVNLTVSGRTLKFYMNDTHEYDSKEILAVDKDYFIFYGHPPAAPSGLALIHYRQSCPKIKRVKKALKNVCL--------------DYKYFGNDTSVPCHY--- | |||||||||||||
2 | 2l4zA | 0.17 | 0.11 | 3.63 | 0.35 | FFAS-3D | -------------SIDPGADLSQYKMDVTVIDTKDGSQ----------SKLGGGGSGGHMGSGGLSWKRCAGCGGKILYAMDSYWHSRC---------------------------LKCSCQ-AQLGDIGTSSYTKSGMILCRND | |||||||||||||
3 | 6qt9Y | 0.12 | 0.10 | 3.68 | 0.66 | MUSTER | -ERLGRLVDVLETKEFGDTTVERSVTQNIDRTRTDSPNNENQPIYFSTGPEAIAVENTEEWERVAETVNIRTTDDIDIAFAD---NKNGPVIRVREGESPFT-----IGGDAGIESAFI---WLRQAE--TASNTPGIQIIAF-- | |||||||||||||
4 | 5gsmA | 0.14 | 0.06 | 2.11 | 0.71 | CNFpred | ---------------------------------------------------------------LFTLLAMSNTPFDAVDLEDVTLDELYDQLWVYSLDFMSREVQDKLVEFRGGNLVILPMLPRYD------------------- | |||||||||||||
5 | 1cfiA | 0.26 | 0.06 | 1.91 | 0.53 | HHsearch-2 | --------------------------------------------YNSG------------KLFVQGNLRCMKCSFARVNTRTTFWKQYVD------------------------------------------------------- | |||||||||||||
6 | 1pquA1 | 0.12 | 0.09 | 3.14 | 0.78 | Neff-PPAS | -VLMDRMSQENDFEN--------------------------LNPVFFTTSQAGQKAPVFGGKD----------AGDLKSAFDIEELKKLDIIVTCQGGDYTNEVYPKLKATGWDGYWVDAASALRMKDDAIIVLDPVKTFVG--- | |||||||||||||
7 | 1cfiA | 0.26 | 0.06 | 1.91 | 0.42 | HHsearch | --------------------------------------------YNSG------------KLFVQGNLRCMKCSFARVFTRTTFWKQYVD------------------------------------------------------- | |||||||||||||
8 | 2o6qA2 | 0.08 | 0.08 | 2.97 | 0.68 | SP3 | -------LDRNQLKSLPPRVFDSLTGYNELQSLPKGVFDKLTSLRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPNGIIYMAKWLKKKGGVDTAGCEKGGKAVLEITEKDAASD----CVSP | |||||||||||||
9 | 3zxaC2 | 0.07 | 0.05 | 2.03 | 0.56 | PROSPECTOR2 | SAQIGDFAGVKDGPRLVSWSKTKGTAGWEHDCHFLGTGNFSL-TLFYEKAPVSGLENADASDFSVLGEAAAGSVQWA----GVKVAERGQGVKMVTTEEQ-----------------------------------PKGKWQALRI | |||||||||||||
10 | 5w16A1 | 0.17 | 0.10 | 3.17 | 0.51 | FFAS03 | ---------------------------------VEPAARAARGFRKVGLIGTQATVESGAYPRYVDLAWAKACPLFVPLVEEGLWDDPVALLVARHYLEDAPKDLEALI---GCTHY---------------------------- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |