Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | NELLEKYYKHGSKFLTSFPDGTTQIFYPSGNLAIIRVPNKTNGFTCIVQEDMSTNPAILAVLDSSGRSSCYHPNGNVWVYINILGGQYSDQAGNRVRAWNWSSSVTSSTFVSFKPVFLALNHYVGVRILEQDKISITFLAMGQQARISVGTKVKLLNPEEIPIFRYMNGDDLLLLASLIKIRRLFHKLEGCVNFPSSQVWEKF |
1 | 5edfA | 0.12 | 0.10 | 3.65 | 0.80 | SPARKS-K | | SFNNPEPTGFEHTVTFDFQ-GTKVIPY--GYLAKWLSDTPINLIEISVYYKKTDQGWVLEPYNQQNKAHFIGLDSVDDIVIRKYGVK---KPSAYPEYEAYEDKRHIPENPYFHEFYYIKNPIITHRNNRINSTSVGSCINGFTVQYYPFIREKQQLT------------QQELVGYHQQVEQLVQSFVNN------------ |
2 | 4by2A | 0.09 | 0.06 | 2.43 | 0.74 | FFAS-3D | | RLAPRPSAAVFKR-EITNADGSKDIWYPNGNL---KKISADGMNLRMLYFNKDREGTVKYYYAETNTWHTSYLDGLEILEFPNGQTEHRRKDGTVEIHFPNNSIKIVDPSDTEKLEEWRYADGTHLVQLRNGDKILNLPNGQKEIH--------------------------------------------------------- |
3 | 4by2A | 0.11 | 0.06 | 2.30 | 0.45 | HHpred | | --SKDIWYPNGNLKKI-SADGMNLMLYFNKDIKETN---IREGTVKYYYAET---NTWHTSY-LDGLEILEFKDGTVEIHF-PNNIKIVDPSDTELEEWRYADGTH---------LVQLRNGDKILNLPNGQEIH-------------------------------------------------------------------- |
4 | 6n2cA2 | 0.11 | 0.10 | 3.55 | 0.77 | MUSTER | | SNIFDGLFSSDKIIFNNNITVTTRNMYSSSDITLRSDNNRPGDNIIVFIFGGNNKVVVNNLMYTKN-GITFNGNNNSNSLLFSDGTISLSGKDEIVANALFCDTLDIRNGSSN---LVTINEYFNKLNIWTDKMVLK-KLFGGDIEIRNDGILSADVGTVVYQIPYPT------------IPAIIEEIKK--TFPTNWI---- |
5 | 5ex7A | 0.12 | 0.08 | 2.77 | 1.21 | CNFpred | | --RIQIFDKEGRFKFQFG-YPNRVAVVRSGDIIVTERS---PTHQIQIYNQ---YGQFVRKFG-HPRGVTVDNKGRIIVVECKMRVIIFDQNGNVLHKFGCSK-------HLEFPNGVVVNQEIFISDNR-AHCVKVFNYEQYLRQIGG------------------------------------------------------ |
6 | 4by2A | 0.16 | 0.10 | 3.27 | 0.78 | HHsearch-2 | | RLAPRPSAAVFKR-EITNADGSKDIWYPNGNLKKISAENIREGTVKYYYAE---TNTWHTSY-LDGLEILEFPNGQTEHRRKPNNIKIVDPSDTELEEWRYADGTHL---------VQLRNGDKI-------------------LNLPNGQKEIHTK---------------------------------------------- |
7 | 6n2cA2 | 0.11 | 0.10 | 3.70 | 0.91 | Neff-PPAS | | --TTYGLFSSDKIIFNNNITVTTRNMYSSSDITLRSDNNRPGDYTIKADNIIVKNGSFIFGGNNKVNNLMYTKNGESNSLLFSDGTISLSGKDEIVANALFCDTLDIRNGSSN-LVTINEFAYFNKLNIWTDKMVLKSNSKLFGGDIEIRNDGILSADVGTVVYQIPYPT-------------IPAIIEEIKKNTFPTNWI-- |
8 | 4ld1A1 | 0.09 | 0.04 | 1.50 | 0.79 | HHsearch | | DGGRLVVFPNGTRKEL-SADGQVKVMFFNGDVKHT----MPDQRVIYYYAE----AQTTHITYPDGMEVLQFPNNQTEKHF-PDGKEITFPDQTVKTL--------------------------------------------------------------------------------------------------------- |
9 | 4ld1A | 0.14 | 0.10 | 3.34 | 0.93 | SP3 | | NGTRKELSADGQTVKVMFFNGDVKHTMPDQR---VIYYYAEAQTTHITYPDGMPNNQTEKHF-PDGRKEITFPDQT-VKTLHPDGEESVLTDGTIIQLN--PDGSKVIQFNTGQREIHTAD---FKRREYPDGTVKTVYSDGRQETQT------------------------------------------------------- |
10 | 3vgzA1 | 0.06 | 0.04 | 2.00 | 0.73 | PROSPECTOR2 | | ELRKA---------VGKGAYEA---YSQQENALWLATRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAKTGEVKGRLVLDDRKRTEEVRPLQPRELVATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGHKQKSTKQQEATQPD-----------DVIRI-----------------AL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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