Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | STFKNKCVSVLCCNFCDHILCTRGMKAVLLADAEIELYSTDIPPTSSVDFVGSCYSTEGCKCKLKDIACLTCGNIVGYHVVAPCKPCLLSCNNGHFWMFHSKAVSAFNRLDSSGMNLLLWGNLPETEESENEDLDSLSEEECIR |
1 | 2rqbA | 0.16 | 0.14 | 4.60 | 1.06 | SPARKS-K | | SYKNNPSLITFLCKNCSVLAC---------SGEDIHVIEVNMTPLYIVRENKALQKKCADYQINGEIIC-KCGQAWGTMMVH------KGLD---LPCLKIRNFVVVFKNNSTKKQYKKWVELPTFPNLDYSECCLFSDED--- |
2 | 5hj0A | 0.15 | 0.10 | 3.49 | 1.21 | CNFpred | | -------PSVFQCKKCFQIVGDSN--AWVISHREYLSFTLSDAVENSVRVEDTFKRSDDGLCVYSELSCTRCNEVIGKVYNSTPIYLDDI---RDMYTFSMDKLQAYQL----------------------------------- |
3 | 5j6pB | 0.19 | 0.12 | 4.03 | 1.11 | SP3 | | ---ESQP-SVFQCKKCFQIVGDREYLSFTLSD----------AVENSVRVEDTFKRSDDGLCVYSELSCTRCNEVIGKVYNSTPIY--LDDIRD-MYTFSMDKLQAYQ----LGN----------------------------- |
4 | 5j6pB | 0.16 | 0.10 | 3.48 | 1.03 | SPARKS-K | | ----ESQPSVFQCKKCFQIVGDS------NAWVLSFTLS--DAVENSVRVEDTFKRSDDGLCVYSELSCTRCNEVIGKVYNSTPIYLDDIRDM---YTFSMDKLQAYQLGN--------------------------------- |
5 | 5j6pB | 0.15 | 0.10 | 3.28 | 0.59 | FFAS-3D | | --------SVFQCKKCFQIVGDSNAWVISHREYLSFTLSDAV--ENSVRVEDTFKRSDDGLCVYSELSCTRCNEVIGKVYNSTPIYLDDIRDM---YTFSMDKLQAYQ------------------------------------ |
6 | 5j6pB | 0.15 | 0.10 | 3.51 | 0.49 | HHpred | | ----ESQPSVFQCKKCFQIVGDSNAWVISHREYLSFTLS--DAVENSVRVEDTFKRSDDGLCVYSELSCTRCNEVIGKVYNSTPIY-L-DDI-RDMYTFSMDKLQAYQLG---------------------------------- |
7 | 2rmjA | 0.11 | 0.10 | 3.48 | 0.89 | MUSTER | | PVPDKE-NKKLLCRKCKALACY-TADVRVIEECHYTVLGDAFK-ECFVSRPHPKPKQFSSFEKRAKIFCANCSHDWGIHVKY---------KTFEIPVIKIESFVVEDIATGVQTLY--WKDFH-------FEKIPFDPAEMSK |
8 | 5j6pA | 0.14 | 0.09 | 3.10 | 1.12 | CNFpred | | ------QPSVFQCKKCFQIVGDSNWVISHRE---YLSFTLSDAVENSVRVEDTFKRSDDGLCVYSELSCTRCNEVIGKVYNSTPIYLDDI---RDMYTFSMDKLQAYQ------------------------------------ |
9 | 5j6pB | 0.15 | 0.10 | 3.51 | 0.82 | HHsearch-2 | | ----ESQPSVFQCKKCFQIVGDSNAWVIS--HREYLSFTLSDAVENSVRVEDTRSDDG--LCVYSELSCTRCNEVIGKVYNSTPIY--LDDIRD-MYTFSMDKLQAYQLGN--------------------------------- |
10 | 5j6pB | 0.16 | 0.11 | 3.70 | 0.98 | Neff-PPAS | | -----SQPSVFQCKKCFQIVGDS--NAWVISHREYLSFTLSDAVENSVRVEDTFKRSDDGLCVYSELSCTRCNEVIGKVYNSTPIY-LDDIRD--MYTFSMDKLQAYQLGN--------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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