Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VAIIKEVYDNENAHETFEYELERALESECSLIIIEPSKLGDETSRWIAVGNCLHKTAALSGLAAITTGLIWGDQPYICGPLGFISAISCGLYTVSWQFDPCCQYQVETNTSKLPHVELLAVLGPSSPTFLVRKDDTRRRILHTTITLIALGISTWRVYQAF |
1 | 4fr2A1 | 0.08 | 0.08 | 3.14 | 0.64 | SPARKS-K | | FLMPSVNFFGPGVISKIGERAKM---LGMKPVIVTDKFLENLKNGAVQTLASLKKSPKIHNIKEVKTLYEKEDADSIITVGGGSAHDTGKGAGIIMTNGDDITKLAGIETLKNPLPPLAGTGSELTRHAVITNEETHLKFVVSWRNIPLVSFNDPTL---- |
2 | 1gytL1 | 0.10 | 0.09 | 3.18 | 0.61 | FFAS-3D | | --IVVGVFEPRRLSPIAEQYISALLRRLSERILL--IGCGKERE--------LDERQYKQVIQKTINTLNDTGSMEAVCNYWKVRQAVETAKETLYSFD---QLKTNKSEPR----------RPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAK-- |
3 | 3s99A | 0.12 | 0.11 | 3.70 | 0.32 | HHpred | | --VETTFLENVAEGADAERSIKRIARAGNKLIFTTSFGYMDPTVKVAKKTNRFYEGRYVQG---VIAAKMSKKGIYIGSPVPEVVQGINSFMLGAQSVNPDFRVKVSWDPGKEADAAKA-LID-QGVDIITQHTDS-----TAAIQVA------------- |
4 | 5flmA | 0.08 | 0.08 | 3.16 | 0.62 | MUSTER | | SVEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMREDREVLRVIFPTDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKLVIVNGDDPL---SRQAQENATLLFNIHLRSTLCSRRMAEEF |
5 | 3rkoB | 0.11 | 0.09 | 3.35 | 0.75 | CNFpred | | ------------LMWATLMLLGGAVGKSAQLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTEVLHLVGIVGAVTLLLAGFAAL---------VQT-----DIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSV |
6 | 4r8kA2 | 0.19 | 0.07 | 2.21 | 0.45 | HHsearch-2 | | KGVVLETFGSGNGPSDLLQELRAAAQRGLIMVNCSQCLRGSVTPGYA-TS--LAGANIVSGL--------------------------------------------------------------------------------------------------- |
7 | 1e2fA | 0.08 | 0.08 | 3.18 | 0.63 | Neff-PPAS | | AELLRFPERSTEIGKLLSSYLQKKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDLVLFGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLG |
8 | 3s99A1 | 0.11 | 0.06 | 2.24 | 0.38 | HHsearch | | DKVETTFLENVAEGADAERSIKRIARAGNKLIFTTSFGYMDPTVKVAK---------------------KFPDVKFEHATGYK-------------TADNMSAYWGPYIDRAKAVLDGTW-KS-QN--I-------------------------------- |
9 | 5ipxA1 | 0.11 | 0.10 | 3.58 | 0.59 | SP3 | | -------YLVPAARANLAYSLQQLYKLGND----KIRGVINGMLPLVDAGCIGFERELIKGLPRVLTLQYPHTAPCTEWCLSHFGRLRSEVRDILTTHNGTCAPSFEWMASVVKKFFLVETVIYED------FQDTDFNVQLNLCFFWTAVVQMYQRCIYE |
10 | 5n2pA | 0.06 | 0.06 | 2.48 | 0.56 | PROSPECTOR2 | | KMLVVYMTLGYPNVQSFKDFIIGAVENGADILELYAKYDGPVIRKSYDKVKGLDIWPLIEDIRKDVLEDWVDQLFPDLLIDYIDDLDKIDGIIKNKGLKNVIFTSPSVPDLLIHKV-----SKISDLFLYYGIPVSVKQLINRVRSAINLVKKFRAILDEY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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