>PF14964 (382 residues) SDLKHTLRKFEFPACAKEALIKIEQLLVGRAAPTSKQLDIAMDIISEFVFCETDRRSNPR RGLNPLQELQLIDIICDYLCACTNDTTKNTIFLSLFGGKESQRKLKILSILASMAVSASS TPVLLAVGVWLQQMGCSSSQSLQLAENIVRDHFYLNTSNQNVLKTLATDAPQFVSNFITA VTELYLHDIQKPKKMPPKNLLEVITSWVYTNPSLCMSAQLNPAALPIGSIPMAAVTPLAG LIHWCALAPLYVDEDIDTDPIPIKKIKLEEEKHTIVKSVTSKSLSETELYIKLHLGVLHS LRAGKRTHGPPTAVNAQHLVALTPIVQAYAHNLIKCGVKFQSDNRLQDCLDRIGQAVQVA LANGCVYGNINNLLAALNSLPE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SDLKHTLRKFEFPACAKEALIKIEQLLVGRAAPTSKQLDIAMDIISEFVFCETDRRSNPRRGLNPLQELQLIDIICDYLCACTNDTTKNTIFLSLFGGKESQRKLKILSILASMAVSASSTPVLLAVGVWLQQMGCSSSQSLQLAENIVRDHFYLNTSNQNVLKTLATDAPQFVSNFITAVTELYLHDIQKPKKMPPKNLLEVITSWVYTNPSLCMSAQLNPAALPIGSIPMAAVTPLAGLIHWCALAPLYVDEDIDTDPIPIKKIKLEEEKHTIVKSVTSKSLSETELYIKLHLGVLHSLRAGKRTHGPPTAVNAQHLVALTPIVQAYAHNLIKCGVKFQSDNRLQDCLDRIGQAVQVALANGCVYGNINNLLAALNSLPE | |||||||||||||||||||
1 | 5oqnA2 | 0.11 | 0.09 | 3.10 | 1.16 | FFAS-3D | --------KEASSATIVLCLTRSSYMLELVNTPLTENILI-ASLMDTLIT------PAVRNTAPNIRELGVMYILGMCVSKGNASIALQVIVDIFVDGEGKVDSISLHKIFYKVLKNNGLPECQVIAAEGLCKLFADVFTDDDLFETLVLSYFSPINSSNEALVQFAFCIPVYCFSHQQRMSRTA------------ADILLRLCVLWDDLQS-----------SVIPEVDREAMLKPNIIFQQLLFDPRNLVNQTGSTKKDT-------------------------VQLTFLIDVLKIYAQIEKKE------IKKMIITNISTLKELLEYSDDIAENDNLDNVSKNALDKLRNNLNSLIEE------------------- | |||||||||||||
2 | 4gmxC | 0.12 | 0.11 | 3.78 | 1.17 | CNFpred | LKLFEFMHEEGVQDMACDTFIKIVQKCKYHFVIQQESEPFIQTIIRDIQKTT--------ADLQPQQVHTFYKACGIIISEERSVAERNRLLSDLMQLP-VKIIANIIKTNVAVCTSMG-LQLYRAVSSMISAQVATKTPKVRGLRTIKKEILKLVETYISKARNLDDVVKVLVEPLLNAVLEDYMNN---VPDARDAEVLNCMTTVVEKVGHMIPQG----------------VILILQSVFECTLDMINKDFTEYPEHRVEFYKLLKVINEKSFAAFL-----PPAAFKLFVDAICWAFKHN----------NRDVEVNGLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLIS | |||||||||||||
3 | 5ifeC | 0.11 | 0.10 | 3.63 | 0.87 | SPARKS-K | EIISRIVDDDEAEQYRKMVMETIEKIMGNLGAADIDH-KLEEQLIDGILYAFQEQTTEDS------VMLNGFGTVVNALGKRPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKEEKLMGHLGVVLYEYGEEYPEVLGSILGALKAIVNVIGPIKDLLPRLTPILEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKNTFGYIAKAIGPHDVLATLQNRVCTTVAIAIVAETCVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDMDRDLVHRQTASAVVQHMSLGVYGFG------CEDSLNHLLNYVWPNVF--------ETSPHVIQAVMGALEGLRVAIGPCRMLQYVRDVYWKIYNSIYI | |||||||||||||
4 | 2f6hX | 0.09 | 0.07 | 2.66 | 1.14 | FFAS-3D | ----------NATQINEELYRLLE-----------DTEILNQEITEGLLKGFEVPDAGVAIQLSKRDPARILIIVLSEMWRFGLTKQSESFLA------------QVLTTIQKVVTQLKGNDLIPSGVFWLANV----RELYSFVVFALNSILTEETMTDEEYKEYVSLVTELKDDFEALSYNIY------------NIWLKKLQKQLQKKAINAVVISESLPGFSAEYTMDDILTFFNSIYWCMVFHAV-----------------------------------VTTLLNYVDAICFNELI------MKRNFLSWKRGLQLNYNVTRLEEWCKTHGLTD-----GTECLQHLIQTAKLLQVRKYTIEDIDILRGICYSLT- | |||||||||||||
5 | 6bq1A | 0.10 | 0.08 | 2.99 | 0.33 | HHpred | ----GSMNRHVAAIGPRFKLLTLGSLLHADV----VPNATIRNVLREKIFSCPPKFPTQGEK-RLREDISIMIKFWTAMFSDKKRGSQLH---KY-----YMKRRTLLLSLL--------ATEIERLITWYNPLSAPELELENSVANWRSKYISLSEKWKDNVNLAWSISPYLAVQLPA--------------RFKTEAIGNEVTRLVRLDPGAVSDVFLVTWHTIDALSHVLCWAPTDPPTGLSYFSSMYPPHP---------------------------------LT--AQ-YGVKVLRSFPPDAIIPQIVQRQLLHQFIWNMKTNIY--LDE-EGHQKDPDIGDLLDQLVEEITGSLSGPAKDFYQREFFNKIKPYPK | |||||||||||||
6 | 2ynsA | 0.10 | 0.10 | 3.57 | 0.80 | MUSTER | PAMIGGVYSDD-NNLQLEATTQFRKLLSI-ERSPPIEEVIQSGVVPRFV--TREDFSGTSENTKVVIDHGAVPIFVKLLGSS-SDDVREQAVWALGNGDSPKCRDLVLANALLPLLAQTKLSMLRNATWTLSNFCGKPQPSFEQTRPALPALARLIHSACWALSYLSDGTNDKIQAVIEAVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKESGGSHDQIKYLVSE----CIKPLCDLLICPDIR----VTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHDN----YEKAVKILEAY-M | |||||||||||||
7 | 4c0oA | 0.10 | 0.08 | 2.88 | 1.16 | CNFpred | NGLLEIARSLLSPEAAVGLLKGTALVLARL--PLDKITECLSELCSVQVMALK--------SSDPTVFLDRLAVIFRHTNP-KVIQEIWPVLSETLNKHADNRIVERCCRCLRFAVRCVSAALLQPLVTQMVNVYHQHSCFLYLGSILVDEYGMEE--------GCRQGLLDMLQALCIPTFQLLEQQNGLQHPDTVDDLFRLATRFIQRSPVTLLR-----------------SQVVIPILQWAIASTTLD------------------------------HRDANCSVMRFLRDLIHTGVAN----------HEEDFELRKELIGQVMN----------------QLGQQLVSQLLHTCCFCLPPYTLPDVAEVLWEIMQ | |||||||||||||
8 | 1vt4I | 0.14 | 0.12 | 4.23 | 0.71 | HHsearch-2 | DMPKSILSKEEIDHAVSGTLRLFWTLLS-------KQEEMVQKFVEEVLNYKSPIKQRQPSMMTRMYIEQRDRLYNDNFAKNVSRLQPYLKLQALLELRPAKSGK----TWVALCLSYKVQCKMDFKIFWLNLKNCNSPETVEMLQKL---LYQIDPNNQAELRRLLKSKPEVKSLLLKYLDC-RPQDLREVLTTNPRRLSIIADNWKHVNCDKLTTISLNEPAMFLSVFPPSAHIPTIL-LSLIWFDVIKSDVMLVEKQPKESTISIP------------------SIYLELKYALHRSIVDHYNIPKSDDLLDQYFYSHIGHHLKNLEQKLKYKPYICDNDPKYERLVNAILDFLP--KIEENLICSKDLLRIALMAEDE | |||||||||||||
9 | 4rxhB | 0.11 | 0.09 | 3.43 | 0.92 | Neff-PPAS | --------RSPHTLVQFEAAWALTNIASGSATQTQVVIEAAVPIFVELLGSPEPDAGDSPQCRDYVLSCGALRPLLTLLGDSRKLSMLRNATWTLSNQPDWNTIAPALPVLAKLVYSLDDEVLIDACWAISYLSDGSNDKIQAVIEAIPRRLVELLMHALRSVGNIVTGDDVQTQVIINCALPCLLSLLSSNKDGIRKEACWTISNITAGNSAQIQSVIDANIIPPLIHLLSHADLKTRKEACWAISNATSGGLQK--------------------------PDQIRYLVAQGCIKPLCDLLACP---------DNKIIQVALDGLENILKVGELDKNAASINRYALFIEECGGMEKIHDCQTNANEEIYMKAYNIIEKYFS | |||||||||||||
10 | 5l3xB2 | 0.13 | 0.06 | 1.99 | 0.78 | HHsearch | AELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQ--LQPVHLALLDEISTC------------HQLLHPQVLQLLVKLFETEHSALDV-MEQ--------LELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEK-DTDISLIRYFVTEVLD-VIA------------PPYTSDFVQLFL----PILENDS---IA-------DPVTEFIAH----CKSNFIMVN--------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |