Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KALKSLQFANPGRQIIEFTPETSRREKRKLQTKQPHQSIADRQTMPPKSKVYDAQGLLIFSGLDLCDCLDEDCLGCFYPCPRCASQKCGVECRCDRKWLYEQIEI |
1 | 5yfpC | 0.08 | 0.07 | 2.65 | 1.12 | SPARKS-K | | RIEAIRNIIKKKEIEIEK-----------SSIKKLPNSKNTARLQDET-----PKVIEYPTNKGLYQEIMSGTISTRTAPRGYKHFLINGINNSISEMFGEMREK |
2 | 4epoG | 0.09 | 0.09 | 3.31 | 1.34 | Neff-PPAS | | RSKKDFEIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDILVLDNCINKMVNNLSSEV |
3 | 5yfpC2 | 0.08 | 0.07 | 2.65 | 1.09 | SPARKS-K | | RIEAIRNIIKKKEIEIEK-----------SSIKKLPNSKNTARLQDET-----PKVIEYPTNKGLYQEIMSGTISTRTAPRGYKHFLINGINNSISEMFGEMREK |
4 | 5xtbB | 0.17 | 0.14 | 4.70 | 0.38 | FFAS-3D | | ------------RAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRFRGALRRYPSGEERCI--ACKLCEAICPKC--IYCGEACPVDAIVEGPNFEF |
5 | 5ml1A | 0.17 | 0.13 | 4.40 | 0.95 | MUSTER | | -----------GSMSSVFGAGCTDVCKQTPCGCATSGCNCTDDCKCQSCKYGAGCTDTCKQTPSGCNCKEDRCQSCSTACKKCGKGKCDRSCSCK---------- |
6 | 2n94A | 0.48 | 0.10 | 2.77 | 0.97 | CNFpred | | ----------------------------------------------------------------------------KYKCPRCLVQTCSLECSKKHK-------- |
7 | 3qwvA | 0.21 | 0.16 | 5.14 | 0.57 | HHsearch-2 | | ------AEARGGLERF-CSAG----KGRGLRAL--------RPFHVG-DLLFSCPAYAC---VLTVGERGHHCECCFSKCGRCKQFYCDVECQKE-DWPLHKLEC |
8 | 1zlgA1 | 0.13 | 0.11 | 3.95 | 1.15 | Neff-PPAS | | --------AGPGAAAARRLDESLSAGSVQRARCASRCLSLQITRISAFFQHFQNNGSLVWCQN------HKQCSKCLEPCKESRKHQCQSFCEPLFPKKSYECLT |
9 | 2kdxA | 0.16 | 0.13 | 4.41 | 0.51 | HHsearch | | EHAKKNQVVGIG-ERSAMDKSLFVSAFETFR----------------EELVCKDAILDIVKVELECDCSHVFKPNADGVCEKCHSKN--VIITQGNEMRLLSLE- |
10 | 5ml1A | 0.18 | 0.14 | 4.66 | 0.85 | SP3 | | -----------GSMSSVFGAGCTDVCKQTATSGCNCTDDCKCQSCKYGAGCTDTCKQTPCGCGSGCNCKEDRCQSCSTACKKCGKGKCDRSCSCK---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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