Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | IKDVGEIYSRLLDHRPVIQGEIRYFVKEFEEKRGLRELRVLENLKNTIFETNEHVLPKCEQAMPGNLNEIFKRLQAANEMMHRLQEKEHEERKREADELMAREEKRAAHWEEFMKEQQNKRAEVDEEHRKAMERLKEQYSEMEKEL |
1 | 4uosA | 0.14 | 0.14 | 4.70 | 1.03 | SPARKS-K | | EKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLGEKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEKAKEMAEKILKMVIELAEKILKKAKEMAEKI |
2 | 2tmaA1 | 0.14 | 0.14 | 4.66 | 1.26 | FFAS-3D | | MQMLKLDKENALDRAEQAEADKKAAEDRSKQL--EDELVSLQKKLKGTEDELDKYSEALKDA-QEKLELAEKKATDAEADVASLNRRIQEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKE-- |
3 | 4tqlA1 | 0.18 | 0.18 | 5.79 | 1.10 | MUSTER | | EKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDDELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIE-- |
4 | 4tqlA1 | 0.18 | 0.18 | 5.79 | 1.09 | Neff-PPAS | | EKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDDELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIE-- |
5 | 4tqlA | 0.14 | 0.13 | 4.47 | 1.00 | SPARKS-K | | VQELEKARDRMEKMVELIQKAIELMRKIFQEVKQEKAIEEMKKLYDEAKKKIEQMIQQIKQGGDK------QKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKM |
6 | 6f1tX1 | 0.19 | 0.17 | 5.51 | 1.24 | FFAS-3D | | -KDLARLGKALLERNQDMSRQYEQMHKELTDK-----LEHLEQEKHELRRRF----ENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQR-----LLDQLSRASEVERQLSMQVHALKEDFREKNSS- |
7 | 6gmhQ | 0.20 | 0.17 | 5.48 | 0.49 | HHpred | | --------VLMFNVALVLQRLATSVLK--DEKSNLKEVLNLELAHRYFSYLSK--LALAA----TEARQCSDLLSQAQYHVARARKQDEEER----ELRAKQEQEKELLRQKLLK-EQEEKRLREKEEQKKLLEQRAQYVEKTKNI |
8 | 4mh6A | 0.08 | 0.08 | 3.03 | 0.98 | MUSTER | | TENLYFQSNAIERLLEIKKIRADRADKAVQRQEYANVAAELQKAERSVADYHVWRQEEEERRFAKAKQQVLLKELETLRQEIALLREREAELKQRVAEVKVTLEQERTLLKQKQQEALQAHKTKEKFVQLQQQEIAEQSRQQQYQE |
9 | 4tqlA | 0.10 | 0.10 | 3.77 | 0.71 | CNFpred | | VQELEKARDRMEKLYKEMVELIQKAIELMRKI-FQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGDKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKM |
10 | 6gmhQ | 0.17 | 0.16 | 5.16 | 0.59 | HHsearch-2 | | LQECKQTLVLMFNV-ALVLQRLATSVLK-DEKSNLKEVLNLELAHRYFSYLSK--LALAAT-EARQCSDLLSQAQYHVARARKQDEEER-------ELRAKQEQEKELLRQKLLKEQEEKRLRE-KEEQKKLLEQRAQYVEKTKNI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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