Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | SELKVRVRLADGQITEEVLEADSEKDSITLEFKQGDGALITFVADFKQDVKVFRALILGELERGQSQYQALCFISRLNHNEIIPSESMARLRQKNPHAIRSAEERRGLDQLTMNVAVNLSRSWQLSSHIHNMCSEAQEAIYTRETDVKHWLERGVEGSMFEILPQAVDVVPPLLPCRSTKALWQPCLCSYSLRLEWYPCLLKYCRNRDTTGKGSPYKCGIKSCSKGYHFTYYVPQKQLCLWDE |
1 | 2q5tA1 | 0.10 | 0.08 | 2.93 | 0.81 | SPARKS-K | | LYYSMTINDEQKGESIITIRATRHYGVIHLDITTENGTKTYSYNRKEGEFAINWLVPIGEDSPA----SIKISVDELDQQRNIIEQTLEQWKTQ--GNVSFSVTRPEHNIAISWPSVSYKAA-QKEGSRHKRWAHWHTG-----LALCWLMDAIYNYETVAGTPKVITVKQGIEQ--------KPVEQRIHDI------LSLFCPDADKSCVASNNDQANINIE------------------- |
2 | 6fszGG | 0.11 | 0.07 | 2.51 | 0.48 | FFAS-3D | | GVQTAYIDYSSNDFVIGVIIG-TFSDSYKVSLQNFSSSVSLSYMAFPNASKLVYARVCTAEKELEAEIECFDSFGILEDGMIVNLNFARQLLFNNDFPLLKVLAAHTKFEVAIGIWVELSNTLACYRTIMECCQKNDTA--AFKDIAKRQFKE------------------------------------------------------------------------------------------ |
3 | 3nx1A | 0.11 | 0.05 | 1.79 | 0.32 | HHpred | | -NYEIYVKNVGNRVDQEAYIVRVGESIYKISWTEPTGTDVSLIVNLGDSLFH--GTIFFPRWVMNNPEPTVCF-----QNDHI--PLMNSYREAGPAYPTEVIDEFATITFVRDCGANNESV------------------------------------------------------------------------------------------------------------------------- |
4 | 5xfnA1 | 0.18 | 0.14 | 4.42 | 0.64 | MUSTER | | EGQDVLARWTDGLYLGTIKKVDSAREVCLVQF--EDDS--QFLVLWKD---ISPAALPGEELLRSETYHQDCHVPRAPAPSWVCRQCVFAIATKRGGALKK------------------------GPYARAMLGMKLSLPYG--------LKGLDWDA-----GHLSNRQQSYCYCGGPGEWNLKMLQ--RSCLQWF-CT--QCLSKPYGDRFYEFEC--CVCRGGPE---KVRRLQL----- |
5 | 4ufcA | 0.14 | 0.08 | 2.69 | 0.85 | CNFpred | | ATTTTRYQVDDVTYTRTTFASF-TDNVIIMHIKA-NALNFTIAYNCPLVHKVLTVTCQGKEQEGLKAALRAECQIQVKTNGTLR---------PAGNTLQINEG--TEATLYISAATNYVVSADESHRTSEYLKRAMQIPYELKNHIAYYKKQ------------------------------------------------------------------------------------------ |
6 | 2yadA | 0.20 | 0.06 | 1.97 | 0.42 | HHsearch-2 | | -------------------------TTAT--FSIGST--GLVVYDYQQLLIAYKPA-----------PGTCCYI-KIAPESIPSLEALTRKVHNFQ-------------------------ECSLG-AVSTLCGEVP--LYY--------I-------------------------------------------------------------------------------------------- |
7 | 2zwiB1 | 0.07 | 0.06 | 2.51 | 0.71 | Neff-PPAS | | -----------------------KNKTIEVYVDRATLPTIQQMTQIINENSNNKKLISWSRYPINDETLLESINGSFFKNRPELIKSLDSMILT-------------NEIKKVIINGNTLWAVDVVNIIKSIEALGKKTEIEGSAEYVRLYDFSRLPESEQEYKISLSKDNIQSSINGTQPFDNSIENIYLYPTTYHMLRADIFETNLP---LTSLKRVISNNIKQMKWDYFFNSQQKNKFYN |
8 | 2yadA | 0.20 | 0.06 | 1.97 | 0.52 | HHsearch | | ---------------------------TTATFSIGS--TGLVVYDYQQLLIAYKPA-----------PGTCCYI-KIAPESIPSLEALTRKVHNFQ-------------------------ECSLG-AVSTLCGEVP--LYY--------I-------------------------------------------------------------------------------------------- |
9 | 5c7qA | 0.11 | 0.07 | 2.54 | 0.56 | SP3 | | KIEQDQVQAPDGRTYTREYIL--HPGAAMMIPLLPNGNVMIHQYRHAVK-KVFLEFPAGKRDHNEETLLTAK---RELLEETYEAKDWKFL-----TTIHPVIGYSNEHIDLYLARDLTHLEQRLDQ------GEFIEVVEVKPADLMQLVLEGSDVKTQIGAFWLDKFLRGEWN-------------------------------------------------------------------- |
10 | 3g3lA | 0.12 | 0.10 | 3.66 | 0.82 | PROSPECTOR2 | | PAAGTITDATTGQELKVTLGDKSVTSSFNEQVNYKAEGYAL-VVSADGYYPVKRQVYLNQVSDGQTSVATVNVALVSVEAAVIP-----------PVVPPTDPETDINE-----------------GEATKVADKAVEVAKPSESTVTDLAGTTATPEEKKALDETLEAGGKVGETTPEVLADGSILAITPVKFTELTGDVKEVAAPVAVANNAGFVQKIGYTRVSKKLTFLISGKYYENYYS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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