Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | RYGVRSYLHQFYEDCTASIWEYEDDFQIQRSPNRWNSVLWKVGLISGTVFLILGLTVLAVGFLVPPKIEAFGEGDFVMVDSQAIQFNGALDICKLSGAVLFCIGGMTMAVCLLMSAFAKSYSKEEKYLQQ |
1 | 3mk7A3 | 0.11 | 0.11 | 3.88 | 0.91 | SPARKS-K | | HVHAGALGWVAMVSIGALYHLVPKVFGREQMHSIGLINTHFWLATIGTVLYIASMWVNGIAQGLMWRAIN-DDGTLTYSFVESLEASHPGFVVRMIGGAIFFAGMLVMAYNTWRTVQAAKPAEYDAA--- |
2 | 3mk7A3 | 0.12 | 0.10 | 3.57 | 0.62 | FFAS-3D | | -MVSIGALYHLVPKVFGR--------EQMHSIGLINTHFWLATIGTVLYIASMWVNGIAQG---LMWRAINDDGTLTYSFVESLEASHPGFVVRMIGGAIFFAGMLVMAYNTWRTVQAAKPAEYD----- |
3 | 1fftA | 0.17 | 0.12 | 3.80 | 0.30 | HHpred | | --------------------------PKAFG-FKLNETWGKRAWIIGFFVAFMPLYALGF-MGMTRRLSQQI-------DPQ----FHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDTGDP-- |
4 | 6mjpF3 | 0.10 | 0.08 | 3.16 | 0.80 | MUSTER | | ----------------ERDWEALPTLSLLNNADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGRFAKMGPAILIYLTYFLALSATKSAIEDGLWPINAALLLAALMVNTLDSIPVRRFKDRWKQR |
5 | 5gpjA | 0.09 | 0.06 | 2.38 | 0.83 | CNFpred | | ----------------------------------YGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAG---SHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTP |
6 | 1q90R | 0.23 | 0.07 | 2.17 | 0.40 | HHsearch-2 | | ---------------------------SSEVPDMNKRNIMNLILAGGAGLPITTLALGYGAFFVPP---------------------------------------------------------------- |
7 | 2zcxA | 0.05 | 0.05 | 2.24 | 0.86 | Neff-PPAS | | -FEFLKITAEGWKEWSAELCARLRELPGAAPDAVGQVFAATLAARPLFCDLLAQAPLNLERNVSVESVRSFKIATLDEVGRIGAELRRLLGVDETQAVDVIATATSLAGALWQMATPGPHIQTLYRSDPR |
8 | 5tcxA | 0.18 | 0.11 | 3.51 | 0.47 | HHsearch | | -----------------------------------STKSIKYLFVFNFVFWLAGGVILGVALWLRH-------------PN---TFYVGIYILIAVGAVMMFVGFLCLVIAAGIWGFVNKDQIAKDVKQ- |
9 | 5ncrA | 0.07 | 0.07 | 2.80 | 0.74 | SP3 | | ---------EWYARLLLRCTRAGPPLALPSGMTRLTDHVYLGSAEDARAVLRGDFKCLVMTMSKYSTPAGIRDDDKTNIASIMPALVKLLARLEAEQKPTLNRSGAAAMGYVMHKRLAETMTQPARFVYF |
10 | 5i5nA | 0.13 | 0.12 | 4.28 | 0.53 | PROSPECTOR2 | | NLPVRSFSEVCCAEARAAIIQMENN-----PDETVCNRIWKIHRDLLTTTVQVMMVYRFISKRVPEGCFAILSGVNTGMYNPRELKRSYVQSLSSGTSCEFLLAKNLLAVHVCSDVKMSLNKRQDFISGE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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