Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | WFECKIRYEKTMENGMQKKVTEPYLVDALSFTEAEARIIEEMTPFISGEFTVSDIKRANYSELFPSEEEAADRWFKCKLVFITLDEKSGAEKKTSTQVLVQAADLRDAVKKLDEGMKGTMADYQIASVAETAIMDVYPY |
1 | 4o6mA1 | 0.15 | 0.12 | 4.10 | 0.71 | SPARKS-K | | ---MRLAYVKNHEGEK---------LLGLTL---RERIEKTLQRA---GFDVRFFDELSL--------EEAEDYLIILEPVLILERDEGRKILVSVGYFFGGDNLQSSIEKYLSLNN--LESYEIWAIKLSNDNLKTAE |
2 | 5vqgA | 0.11 | 0.10 | 3.60 | 0.55 | FFAS-3D | | -IEVYVSAVS--------SPSRFWVQFVGPQVAQLDDLVAHMTEYYSKKENRHTLRHVSVGQVVAAVFRHDGRWYRARVHDIRPNEFDSSQQVADVFYLVATHELPQAVERFEELTQVARWKALVSRTCTYK------- |
3 | 2qyxB | 0.14 | 0.06 | 1.96 | 0.28 | HHpred | | -------------------------------------------------------------------------------AKVTYDIDEADGDVIVNTAFIDKKYLDEAFDILKEAYKKGLGISDRFGIVENDRIKI--- |
4 | 3l7yA | 0.14 | 0.13 | 4.45 | 0.70 | MUSTER | | HFPCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEKYPQ--AVIALSGEKKGYLKKGVSENIVKMLSPFFVLELVNSSPLPERFFKLTLQVKEEESAQIMKAIADYKTSQRLVGTASG----GYIDIITK |
5 | 5lj8A | 0.10 | 0.07 | 2.67 | 0.67 | CNFpred | | ----------------------VVVLDSN----TRRQLFPHKADVVGEVILVGNM-PARVIGVAEEKQSMFGS-SKVLRVWLPYST-RVMGQSWLNSITVRVKDSAEAEQQLTRLLSHGKKDFFTWNMDL--------- |
6 | 6b9mA | 0.12 | 0.10 | 3.57 | 0.47 | HHsearch-2 | | WFEAQIVKVTKTPAEDGGPEEIVYHVKYEDYPENVQLRGKDVRPRARTVYQWRQLEPGMIVMVNYNPDKERGYWYDAEIQRKR-E--TRTQREVFGKILLGDAG-------------DSLNDCRI-----MFVTEIYKI |
7 | 5j6qA2 | 0.14 | 0.10 | 3.44 | 0.75 | Neff-PPAS | | --------------ADLQDISAEELFDGIRLTTLGREIVNKVKNGYALTFENEAILTQEQED---SDDKDKPEKSSFDIVLSKA----NEKPETISVSSKNHKLVRDLHKVLTDVKDGKEL------------------ |
8 | 2wnmA | 0.16 | 0.06 | 2.17 | 0.32 | HHsearch | | ---------------------------------------------------------------TGSL-SVDNKKFWATVESS--E--------HSFEVPIYAETLDEALELAEWQYVPA--GFEVTRVRPCVA----P- |
9 | 5m9nA | 0.10 | 0.09 | 3.44 | 0.65 | SP3 | | EFCGVVAHIQTP--------EDFFCQQ-LQSGRKLAELQASLSKYCD---QLPPRSDFYPADICCAQFSEDDQWYRASVLAYASEESYGNFEILSLMRLCPIAGVPEAICLMKKLVQNKIITVKVVDKLENSSVELIDK |
10 | 5ejjA3 | 0.13 | 0.10 | 3.50 | 0.56 | PROSPECTOR2 | | LCVSRVGYEWSLRAGREQE----------DVKSAAERLSMASFRFAEHGLVIREQKPEAAQQKYLDKFSKGAVPYKDVIEFTAMQSLTFTRLVTIGEVVFPGDSSLDLYKRSREAFNR--------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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