Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | TPRLEVHPRKVEFGNVLPLRRYVTTVRLTNASTVPCRYRVRVGAVVRPFLSVSYSRQFVAPGITTEMHVELSGSQPYGVMDSHISIVHEGGTVEVNVWWCTT |
1 | 2e6jA | 0.11 | 0.11 | 3.90 | 1.61 | SPARKS-K | | GPKIHFNFELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPSALGACFVFSPKEGIIEPSGVQAIQISFSSIIL-GNFEEEFLVNVNGSPEPVKLTIRGC |
2 | 3qbtF | 0.17 | 0.17 | 5.50 | 1.62 | FFAS-3D | | LPSLELSRREFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKQYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDEDKIEDILVLHLDRGKLTISGNYLPS |
3 | 3qbtF | 0.17 | 0.17 | 5.49 | 1.58 | HHpred | | LPSLELSRREFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKQYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDEDKIEDILVLHLDRGK-DYFLTISGN |
4 | 2e6jA | 0.11 | 0.11 | 3.90 | 2.11 | MUSTER | | GPKIHFNFELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPTSLGACFVFSPKEGIIEPSGVQAIQISFSSII-LGNFEEEFLVNVNPEPVKLTIRGCVI |
5 | 3qbtB | 0.16 | 0.16 | 5.22 | 1.60 | CNFpred | | LPSLELSRREFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPK-YCKPWLRAEPFEGYLEPNETVDISLDVYVSK-EDKIEDILVLHLDRKDYFLTISGNYL |
6 | 3qbtF | 0.17 | 0.17 | 5.49 | 1.34 | HHsearch-2 | | LPSLELSRREFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDEDKIEDILVLHLDRGK-DYFLTISGN |
7 | 2e6jA | 0.12 | 0.12 | 4.17 | 2.10 | Neff-PPAS | | GPKIHFNFELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPSALGACFVFSPKEGIIEPSGVQAIQISFSS-IILGNFEEEFLVNVNGSPVKLTIRGCVI |
8 | 3qbtF | 0.17 | 0.17 | 5.48 | 2.09 | HHsearch | | LPSLELSRREFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDEDKIEDILVLHLDRGK-DYFLTISG- |
9 | 3qbtF | 0.17 | 0.17 | 5.50 | 1.04 | PROSPECTOR2 | | LPSLELSRREFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDSDKIEDILVLHLDRGKDTISGNYLPS |
10 | 3qbtF | 0.19 | 0.17 | 5.38 | 0.97 | SAM | | -PSLELSRREFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDEDKIEDILVLHLDRG----------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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