>PF14816 (352 residues) TSGGSESYINSLDYLLQEKREQAQEQEREKLLLQDCPDLNSLDLNEDEVPLTPEHRMLVE RFSVSLQVIPPVHPGETVFLPRCHPLPCILDSAHLKPRSHLEGLFLSSPPAQQLSFLRSG LLSNLYLHTHNCPVPVLQWLFQLLTWPPETSLGAFGLLWDLSVDGLFCQSDEDVHLWCPS LQEVKEVFHSLGAHSPALYPQGPFQHRGRELKREVSLSGSEQQDTPQETALDISLSYIYK FLTLCALAQPGAYTDANLLVLIELLCRAGLDMGLRLLPKTDLQQLLLLLLENIQEWPGKL RQLCCALSWVSDHHHNLLALVQFFLDVTPRGRQLRSQLSLVVIARMLGQQET |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TSGGSESYINSLDYLLQEKREQAQEQEREKLLLQDCPDLNSLDLNEDEVPLTPEHRMLVERFSVSLQVIPPVHPGETVFLPRCHPLPCILDSAHLKPRSHLEGLFLSSPPAQQLSFLRSGLLSNLYLHTHNCPVPVLQWLFQLLTWPPETSLGAFGLLWDLSVDGLFCQSDEDVHLWCPSLQEVKEVFHSLGAHSPALYPQGPFQHRGRELKREVSLSGSEQQDTPQETALDISLSYIYKFLTLCALAQPGAYTDANLLVLIELLCRAGLDMGLRLLPKTDLQQLLLLLLENIQEWPGKLRQLCCALSWVSDHHHNLLALVQFFLDVTPRGRQLRSQLSLVVIARMLGQQET | |||||||||||||||||||
1 | 5u1sA1 | 0.09 | 0.09 | 3.43 | 1.01 | FFAS-3D | SIGILAMHNNIIRDFTKIASNIEDITTVDHSLNSIYSLLKSHHMWGHINSTVKQHLMIIVKLGLASSEI------IFLFNETNLFQAHSLKNILLADFSALQIILKRKLVDEYLPHILELFSKRYLLKDPNLKAALTKIVLSFFSVTTSCKVLFGLKFLQYISKNLLHKNYLEMGPNKIYLNSFYLSYSMLYDGLDKIMLLDILSYEETTEEYCNMSENRLLWSCISVDDLNVILEKCLVCLWSTIRLEGLPKNKDILRQFTVIYINSNIKSINDESAAALLSELLGVLSEICIDYKSNIISVLFNASVLFKSHSFLLKTANLISNDSKTSHRTILKFKIEIFSCLFN---- | |||||||||||||
2 | 3m1iC | 0.10 | 0.08 | 3.05 | 1.03 | CNFpred | ---------NILELLSTKFMTSPDTRAITLKCLTEVSNLKIPQDN------DLIKRQTVLFFQNTLQQIA---------------------TSVMPVTADLKATYANADQSFLQDLALTTYLARNRALLRELLLNAHQYLIQLSKIERELFKTTLDYWHNLVADLFYE-----PLKKHIYEEICSQLRLVIIE--NMVRPEEVLVVEGEIVREFV-----------KESDTIQLYKSEREVLVYLTHLN-----VIDTEEIMISKLARQIDGSE--WSWHNINTLSWAIGSIS-TEKRFVVTVIKDLLDLTNKAVVASDIMYVVGQYPRFLKAHFLRTVILKLFEFMHETHE | |||||||||||||
3 | 1vt4I | 0.14 | 0.12 | 4.27 | 1.12 | HHsearch-2 | DMPKSILSKEEIDHIIMSKDAVSGTLEMVQKFVEEVLRINSPIKTERPSMMTRMYIEQRDRLYND----------------NQVFAKY--NVSRLQPYLKLQALLLGSGKTWVALDVCLSYKVQCKMDFK------IFWLNLKNCNSPETVEMLQKLLYQIDPNWTS---RSDHS---S---NIKLRIHSIQAELRRLLKS---KPYENCLLVLLNVQNAKNAFNSCKILLTTRFKQVTDFLSAATTHHSMTLTPDEVKSLLLKYLPQDLPREVLTTNPRRLSIIAESIRDGLDNWKHVLTTIIESSLNVLEPAEYRFDRLSVFPPSPERMTLFRVFLDFRFLEQKIRHDST | |||||||||||||
4 | 1vt4I | 0.13 | 0.12 | 4.21 | 1.66 | HHsearch | DMPKSILSKEEIDHIIMSKDAVSGTEEMVQKFVEEVLRINY--------KFLMSPIKTEQRQPSMMTRMYI-EQRDRLYNDNQVFAK--YNVSRLQPYLKLQALLLGSGKTWVALDVCLSYKVQCKMDFK------IFWLNLKNCNSPETVLMLQKLLYQIDPNWTS---RSDHS------SNIKLRIHSIQAELRRLLKS---KPYENCLLVLLNVQNANAFNLSCKILLTTRFKQVTDFLSAATTHHSMTLTPDEVKSLLLKYLPQDLPREVLTTNPRRLSIIAESIRDGLDNWKHKLTTIIESSLNVLEPAEYRFDRLSVFPP-SAHIPTILLSLIMVVVNK-LHKYS- | |||||||||||||
5 | 5z2cA | 0.14 | 0.11 | 3.89 | 0.83 | SPARKS-K | -------------------NNQKVVAVLLQECKQVLDQLEAPDVSEEDKLLPSELRTLIQEAKEMK-------W---PFVPEKW--QYKQAVGPEDKTN-LKDVIGAG-LQQLLASLRASILARDC-------AAAAAIVFLVDRFVSGKLLQVAKGLHKLQ--------PATPIAPQVVIRQARISVNS-----------GKLLKAEYILSSLISNNGATGTWLYRNESDKVLVQSVCIQIRGQILQKLGMW-YEAAELIWASIVGYLA---LPQPDKKGLSTSLGILADIFVSMKNDYEKFKLSLLKEFDHAAEACKLAAAFSAYTPLFVLTAVNIRGTCLLSYSSSNDC | |||||||||||||
6 | 3peuB | 0.11 | 0.08 | 2.99 | 0.93 | FFAS-3D | ---------TNFDKISKFWHYKDKIAQIKQDIVLPIKK--------ADVNVRNLLSRHKRKINPKFGQLTNSN--QQL----------------FKIQNELTQLINDTKGDSLAYHW---ILNFIA-------KAVVRQAETEVRVKPESALPLGKLTLYLLVQ----------------FPELQELFARLVKKCPFVIGFTCEIDTEKGRQNGWKRNNENKWEDNT---SYDERGGILSLFAIITRLTSHPFPIALSWHILARICNTPLNL-----ITNTHFVILGSWWDALQAYGNQASKLLILIGE---------ELTSRAEKKYVGAARLR-----ILLEAWQNNNES | |||||||||||||
7 | 5hiuA | 0.14 | 0.10 | 3.42 | 0.36 | HHpred | ------------------------QADLVAKLKNG-----HLS---ERVLAANKLRFAVVDFPLNP--------VHAIWHAAK-------------------DMIPENPDNARQASWE--LLIECVKYP-NSTELERSEYFHTLTGPAHSKFYQLVALEQLTNHGRNIAGFYYLTLWLNQAYRAARDAR-----------------------KLAL-A------R-PASPEDKNLSQLFALVKDVIKFNFKFATDDVIAGLIDMLLKICMLTLVTFIPTNKLKYCIQVLSSIHPSLQKEAWHTISIICRSHHGQSTLLDFLRSYSPNPDDTVRD-VRGALSVLQKLLRKTAE | |||||||||||||
8 | 3nowA | 0.11 | 0.11 | 3.80 | 0.87 | MUSTER | DYKYESAMDITLARIYENMYYDEAKARFTDQIDEYIKDKLLAPDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILA-TTDDELQQRVIAASSKKDKAKALCEQSKNDGIRVRALVGLCKLGSYGGQDALKLAEACRRFLIKPKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEITTALCALAKTE----SHNSQELIARVLNAVCGLKELRGKVVQE---GVKALLRMALE-EKGKRHATQALARIGRSLDVIRPLLNLLQQDCT---ALENFESLMALTNLASMNES | |||||||||||||
9 | 5dh9C | 0.10 | 0.08 | 3.03 | 1.03 | CNFpred | --------PEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQ---TQAKALHLKNSMSKEFEQIF----------------------------KLCFQVLEQGSSSSLIVATL-ESLLRYLHWIYIYETNILELLSTKFMTSPDTRAITLKCLTEVSNLKIPQ----DNDLIKRTVLFFQNTLQQIA--TSVMPVTADLKATYANA----------------NGNDQSFLQDLAMFLTTYLARNRALLLRELLLNAHQYLIQLSKIE---RELFKTTLDYWHNLVADLF-YEEICSQLRLVIIENMVRIQLYKSEREVL----VYLTHLNVIDTEEIMISKLARQID | |||||||||||||
10 | 2pffB | 0.11 | 0.10 | 3.62 | 0.89 | HHsearch-2 | EFENCYLEGNDIHALAAKLLQLVKTKELIKNYITARIMANSALNAQNTDDYFEELRDLYQTYHVLSELIRTTLDAEKVFTQGLNILE-WLENPSNTP---DKDYLL-SIPISCPLIGVIQLAHVVTAKLLGFTPGELRSYLETDSWESFFVRKAITVLFFIGVRCY-----EAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQDYVNTSLKQVEISLVNGLVVSGPPQSLYGLNLTLRKA--KAPSGLDQSRIPF---SERKLKFSNRFLPVLLVPASDLINKDL---VKNNVSFNAKDIQIPVTVLSGSISERIVDCIIRLVKWETTTQF-----KATHILDFGPG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |