Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | QEPILATQENGDFEPLYTAPVFSFHLLISSIISVTGIALAATWDDSKRCEAYFIMMYLRVAFWILTYLIDYLVKKHHRALALKGYLDFNRTTKHHSTIPLQIVSLWNTFLLAIHTLMQHYYGDDFGQKCIVVGWLAPIVYITAFSCLETGVLSIVNGSYIAKVRRFNRTAAPPDALQDNRGMRGGSVGLTQRGLSTTELLEKQADLINYLKDHNLKLNQKIMQM |
1 | 5cwmA | 0.08 | 0.07 | 2.82 | 0.84 | SPARKS-K | | VEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESALERALRVAAARLAKRVLELAEKQPEVALRAVELVVRVAELLLRIAKESGSEEALERALVAEEAARLAKRVLELAEKVELVKRVAELLERIARESGS---------------------EEAKERAERVREEARELQERVKELRER---- |
2 | 6nf6A2 | 0.08 | 0.06 | 2.52 | 1.02 | FFAS-3D | | ---------------------PLLGAAAVIIGICVFMMYQIQATGSAPNYQVFVLYYSYYI--VLLPLMCVVAIIGTIIHTLEKPTRSLDVV-------LLMGAALGQIAMSYFSIVAIVATNPRDMLNSLILSYSVLLIFQYITQNIFIIISFFLVLCNIILWIMPTFGAHPVFENGLQKSFYGYST-------WFAIVNFGLPLSVFYRMHSVGGLLEVYV- |
3 | 5tgzA | 0.08 | 0.06 | 2.26 | 0.29 | HHpred | | -----------HSRSLRCYHFIGSLAVADLLGSVISFIDFHVFHRKNLFKLGGVTASFTASVGSLLAAIDRYISIHRPLA--------YKRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDKTYLMFWIGVVSVLLLFIVYAYMYILWKAHSHAVAKAL------------------------------------------------- |
4 | 5a22A | 0.10 | 0.09 | 3.35 | 0.70 | MUSTER | | EEITLDSSMDYTPPDVSVLKTWRNYQVGRCIGFLYGDLAYRKSTHAEDSSLFPLSIQGRIGRGFLKGLLDGLMRASCCQVIHRRSLA---HLKRPANAVYGGLIYLIDKLSVSPPFLSLTRSGPIRDELETIPHKIPTSYPTSNRDMGVIVRNYFKYQCRLIEKG-------KYRSHYSQLWLFSDV----LSIDFIGPFSISTTLLQILYKPSGKDKNELREL |
5 | 3rkoC | 0.10 | 0.07 | 2.68 | 0.95 | CNFpred | | ------------------LPDAHSQAPTAGSVDLAGILLKT-----------AAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT----------------GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTR-----------MRMMGGLWSKMKWLPALSLFFAVATLGNFVGEFMILFGSFQV |
6 | 6cknA | 0.29 | 0.04 | 1.22 | 0.67 | HHsearch-2 | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASIEQLLERQWSGLHQLQVENRRLEEQIKNL |
7 | 5cwmA | 0.06 | 0.06 | 2.47 | 0.91 | Neff-PPAS | | EKGS----------------EEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESG--SEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRER---- |
8 | 6cknA | 0.30 | 0.04 | 1.22 | 0.66 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASIEQLLERQWSGLHQLQVENRRLEEQIKN- |
9 | 5cwmA | 0.05 | 0.04 | 2.10 | 0.79 | SP3 | | EELLRQAKEKGS--------EEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGS--------EEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVEL------VKRVAELLERIARESGS--EEAKERAERVREEAREL |
10 | 5cwmA | 0.03 | 0.03 | 1.63 | 0.87 | PROSPECTOR2 | | DPEDELKRVEKLVKEAEELLRQALEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRV---------------AELLLRIAALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVEL------VKRVAELLERIARESKERAERVREEARELQERVKEL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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