Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | KEFEEAAPEEVQESGHKAVHSALLAEGPNNEQVQVVAGEQLKLGGCGLAVGNAHEGALVSAGLINLVGGNLSPSDPMKENMLNSREDEPLDLSQPAPASTTTLVREQTPDNPGSDAGALPVTVREFVPTGPILCHVEHCGTESGDSSSPLDLSDAQTLDQPLNLSLAAWPVRATASDPGWVHGRREPVFVKPRNAFSDGDSALQF |
1 | 5jcss | 0.07 | 0.07 | 2.84 | 1.42 | SPARKS-K | | QVDLTRQISYITEELTNIVRENMKLSPNATAIMEGLNLLKYLLNNIVTPEKFQDFRNRFNRFFSHLEGHPLLKTMSMNIEKMTEIITKEASVKFEWFDGMSQEDGQPRVLKPHPNFRLFLTPKYEIYIDELHSRSTADRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSIPLKHYVPSYLSRPCIFAQVH-DILLLSDEEPIEE |
2 | 4k0mC | 0.10 | 0.09 | 3.43 | 1.21 | MUSTER | | KVYTIDEAARTAKFDETVEVHAKLGIDPRRSDQ--------NVRGTVSLPHGLGKQVRVLAIAK---GEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---- |
3 | 6e5p2 | 0.08 | 0.08 | 3.06 | 1.61 | Neff-PPAS | | -EVQLVESGGGLVKAGGSLILSCGVSNFR--------ISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVEARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQT |
4 | 4k0mC | 0.09 | 0.08 | 3.17 | 1.36 | PROSPECTOR2 | | KVYTIDEAARTAKFDETVEVHAKLGIDPRRSD---------------QNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
5 | 6emkG | 0.08 | 0.06 | 2.46 | 1.36 | SPARKS-K | | -------------------------------SSLHYASY----HGRYLICVYLIQLG---HDKHELIKTFKGNTCVH-----LALMKGHEQT-------LHLLLQQFPRFINHRGENGRAPIHIACMNDYYQC--LSLLIGVGADLWVMDTNGDTPLHVCLEYGSISCMKMLLNEGDNVRDKGNWKPIDVAQTFEVGNIYSKVLK |
6 | 1w0rA3 | 0.09 | 0.08 | 3.20 | 0.48 | FFAS-3D | | GPVSPCPVT--CGLGQTM-EQRTCNHPVPQHGGPFCAGDATRTHICNTAVPCPVDGEWDSWGEWSPCIRRNMKSISCQEIPGQQSRGRTCRGRKFDGHRCAGQQQDIRHCYSIQHCPLKGGLCMPPCGPNPTRARQRLC-TPLLPKYPPTVSMVEGQGEKNVTFWGRPLPRCEELQGQK-LVVEEKRPCLHVPACKDPEEEEL-- |
7 | 5u8xA | 0.11 | 0.09 | 3.18 | 0.26 | HHpred | | -----------TENFVIFPIIP---LVCDVERMKQ-GGD---HWQWDYS-------I--PM-YIGVLPRRGGSDVKFEPHVANAFEDGHLQMAYAKDNVVEAHFANF--VLDYQSDKLPLAEPTYLDDDMEFPRIDDRVATRKIFDRKVTDGGGAPMSNGHLNHE--------TGDIQRYLKLTGECIFIRNS-EAAEGDGYVM- |
8 | 4aq1A2 | 0.11 | 0.10 | 3.53 | 0.93 | MUSTER | | ---SVPASATVATSPVTVKLNSSDNDLTFEELIFVIDPTQLVKDEDINEFIAVSK--AAKNDGYLYNKPLVTVKDASGEVIPTGANVYGLNHDATNGNIWFDEEQAGLAKKFSDVHFDVDFSLANVVKTGSGTVSSSPSLSDAIQLTNSGDAVSFT-------LVIKSIYVKGADKDDNNLLAAPVSVNV----TVTKGS----- |
9 | 5x2mB | 0.05 | 0.01 | 0.46 | 0.39 | CNFpred | | QQGVQQFSKKAEDMGVCVAYQGLIPIYDDPKPAIQTIINNI-------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 2pffB | 0.18 | 0.18 | 5.71 | 0.94 | HHsearch-2 | | QGNTDDYFEEYQTYHVLVGDSELIRTTLDAEKVFT---QGLNILEWLENPSNTPDDYLLSI-PAKLLGFTGELRSYLKGATTDSWESPSPMLSISNLTQEQVQVNSHLPAGKQVISLVNGAKNLVVS--GPPQSLYGLNLLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVYDDGSDLRVLSSISERIVDIIRLPVKWATHILDF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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