Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | YRRIVGEDDGGKLFTPEEYEKYKKQVLPMRLKNRLYVSWASPTGIDCKLVGPETLCFCTHRYKQHKTDFEEIPNERPVPVPCRVKGCQCKSYLYVPLNGSQPIRCRCKHFADEHSEARGHKCKKCSTCTGFHSSFTCGCGQPTFAHEMIIETKEERLARGRPVGRDVPYAAMGGLTGFSSLAEGYMRLDDSGIG |
1 | 5ml1A | 0.19 | 0.10 | 3.16 | 1.09 | SPARKS-K | | ------------GSMSSVFGAGCTDVCKQTPCGCATSGCNCTDDCKCQSCKYGAGCT-----DTCKQTPCGCGSGCNCKEDCRCQSCACKC-----AAGS----CKC-----------GKGCTGPDSCKCDRS---CSCK------------------------------------------------------ |
2 | 4d90A | 0.19 | 0.10 | 3.34 | 1.03 | MUSTER | | ---------------------------------------PCENGGICLP---SFSCECPDGFTSSVVEVASDEEEPTSAGPCTPNPCHCEISEAYRGDTFIGYVCKCIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMRN----QYK----------------------------------------- |
3 | 4d90A | 0.17 | 0.09 | 3.06 | 1.53 | Neff-PPAS | | ----------------------------------------CENGGICLP---SFSCECPDGFTDPNVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYFIGYVCKCIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYK------------------------------------------- |
4 | 5fmaA | 0.13 | 0.10 | 3.38 | 1.04 | SPARKS-K | | PCANGGQCLPFESYICHCPPSFHGPTCRQDVNECGEKPGLCRHGGTCHNEVGSYRCVC-------RATHTGPNCERPYVP-CSPSPCQNGGTCRPTGDVTHECACLPGFTGQNCEENPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTE-------------------------------------------- |
5 | 2vj3A | 0.18 | 0.09 | 3.02 | 0.46 | FFAS-3D | | ----------------------------------------CEHAGKCINTLGSFECQCLQGY--------TGPRCEIDVNECVSNPCQNDATCLDQIGE---FQCICVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVD------------------------------------------- |
6 | 4kblA | 0.16 | 0.14 | 4.80 | 0.33 | HHpred | | ---CIREVNEVIQNPATITRILLSKLMERYFDGN----MPCQ---ICYLNYPFTGLECGHKFSEYLTTETLITKCNRLLKWCPAPDC--HHVVKVQYPDAKPVRCKCGRQFNWHDPVNTKECPKCHGCNHNCKAEFCWCLGPWEPHGSAWRAALNRYMNSLRFEHKQVKQKWIEVQ---FLKKAVDVLCQC--- |
7 | 5mwbA | 0.17 | 0.10 | 3.21 | 0.98 | MUSTER | | ------DVDECAMANSN----------------------PCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINE--------CHSDPCQNDA-TCLDKIGGF--TCLCVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTPV----QID----------------------------------------- |
8 | 5udhA | 0.13 | 0.03 | 1.08 | 0.55 | CNFpred | | ---------------SKVKLKYQHLITNSFVECNRLLKWCPADCHHVVKVQ-PVRCKCGRQFC----------------------------------------------------------------------------------------------------------------------------------- |
9 | 5c1zA | 0.14 | 0.09 | 3.19 | 0.43 | HHsearch-2 | | PNSLIKELHHFRILGEEQYNRYQQYGAEECVLQMGGV--LCPRGAGLLPEQRKVTCGNGFAFCRECKE--------A-----YHEG-ECSAVFEYRVDARWEAPCRCHVPVEKNGGCMHMKCPQP-QC---RLEWCWNCGCEWNRVGDHWFDV----------------------------------------- |
10 | 2vj3A | 0.17 | 0.09 | 2.89 | 1.53 | Neff-PPAS | | ----------------------------------------CEHAGKCINTLGSFECQCLQGYTGPRCEIDVN--------ECVSNPCQNDATCLDQIG---EFQCICVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLH----------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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