Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | TQTLYRESSAQTLAYLPNIEDKDIDEHVELFKLPSALPGDKPPGLYEVEVLERSRRRWAFNEALTVNLKKQLDEARELAMQTKYKSILEAFEWESWIEREEYIQECQRMRLEIVIKMFDKREKEMHSASKTRMEMACERIEKRRQRGLHKNEIEYQRGKRR |
1 | 5lpnB | 0.11 | 0.08 | 2.89 | 1.09 | FFAS-3D | | --------------------------------------------EEEMKRFCKAQTIQRRLNEIEAALRELEAEGVKLELAQQKKLWVGQLKKNSLVAEEAELMITQELNLEEKQWQLDQELRGYDRQAEDQVLRKLVDLVNQRDALIRFQEERRLSEL-- |
2 | 5t4oI | 0.11 | 0.10 | 3.58 | 1.05 | Neff-PPAS | | -----------------NLNATILGQAIAFVLFVLFAMKYVWPPLMAAIEKRQKEIADGLASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAAN |
3 | 4uosA | 0.12 | 0.11 | 3.96 | 0.91 | SPARKS-K | | ---------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEKKAKEMAEKILKIELAEKILKKAKEMAEKILKKVKELEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEEMAEKILKMVIELAEKILKKAKEMAEKILKK |
4 | 3ajwA | 0.12 | 0.09 | 3.05 | 1.07 | FFAS-3D | | ----------------------------------------------ALETLKDLAEKEDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRSINYQQFIQTLEKAIEQHRLQLTQWTQKVDLALKSWREKKQRLWQTLQDRQTAAALLAENRMDQKKMDEF-- |
5 | 5cwsE | 0.13 | 0.10 | 3.45 | 0.32 | HHpred | | --------VDKWNPNHPNCAFKTNKVDEHTVP----LY--GGPNEDPK----------EWEEALQRKPAPN-FIPLCSGFPSIVARLMLQ----------RRVITEFNNKLHQINASLDAILSRHDLDHTVRAFNARRRHAELSRRCLHLAARVQVLR--- |
6 | 5nnvA | 0.17 | 0.16 | 5.12 | 0.89 | MUSTER | | ESSAISAKEAKIE----DTRDKIQALDESVDELQQVL-------LVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEA |
7 | 1jadA | 0.09 | 0.06 | 2.40 | 0.59 | CNFpred | | -------------------------------------------ATEQTAKITELAKQIAELKALKESSESNIKDI-KKKLEAKRLDRIQVMM-AAQERLKKEINNSHIQEVVQTIKLLTEKTARYQQKLEEKQAENLRAIQEKEGQLQQEAVAEYEEKLKT |
8 | 5cwsE | 0.13 | 0.11 | 3.67 | 0.53 | HHsearch-2 | | IPEQIKLIVDKWNPNHPNCAFKTNKVDEHTVP----LY--GGPNEDPK----------EWEEALQRKPAPN-FIPLCSGFPSIVARLMLQ----------RRVITEFNNKLHQINASLDAILSRHDLDHTVRAFNARRRHAELSRRCLHLAARVQ--VLRN |
9 | 5nnvA | 0.10 | 0.10 | 3.68 | 0.97 | Neff-PPAS | | LQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESS-STSGEEKLEEAAKHKLNDKTKTIEL |
10 | 4cwuT | 0.12 | 0.03 | 1.09 | 0.58 | HHsearch | | AAASKTSTEVQTDPWMFRVSAPR-R------PRGSRKYGA--ASA------------------LLPE---------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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