Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | VEVDPKRLLYVQQREFAATTPADDCVSVIGSDDATTCHLVVLRHTGSGAVCLAHCDGSSTWSEIQLITKAVTSLSNVRDDGRFELHLVGGFNDDAKTSQKLSLSILAAFQKLEEEIHLETCCITEMNDAVVNGIHRPTVYGIGVNVKTGEVFPASFPHKGPAEELRSARTFTGGEMAGIYDSSRGLVEIGPCHWTSDMDIAFWLSQSDDTILKYLSTSPEAEPPHFVQHMKSTIQFLLSHPDSDSLFPGGQPQLYRRSESGAWER |
1 | 2f9zC | 0.13 | 0.07 | 2.36 | 1.36 | HHsearch-2 | | ----AHMKKVIGIGEYAVMKN----PGVIVTLGLGSCVAVCMRDPVAKVGAMAHVMLPDSDTAVKTLVEELKKMGA--KVERLEAKIAGGFESGMNIGARNVEAVKKHLKDFGIKLLAED--TG-------GNR----ARSVEYNIETGKLLVRKVLEIK-EI------------------------------------------------------------------------------------------------------ |
2 | 2f9zC | 0.13 | 0.07 | 2.36 | 1.83 | HHsearch | | ----AHMKKVIGIGEYAVMKNP----GVIVTLGLGSCVAVCMRDPVAKVGAMAHVMLPDSDTAVKTLVEELKKMGA--KVERLEAKIAGGFESGMNIGARNVEAVKKHLKDFGIKLLAED--TGGN-------R----ARSVEYNIETGKLLVRKVLEIK-EI------------------------------------------------------------------------------------------------------ |
3 | 5nd1A | 0.13 | 0.12 | 4.21 | 0.58 | SPARKS-K | | GFAFGVLSRMVMHNSARRHGVVNGRLQELGASTADTYLTWELACAGKGEVAITPLDPEAQLTGRERVFSEALARLVDPDVGCVHVKIDGVLDDNTGLSADSNAGRISTLWKGRHSVHLTIQLYHRMSTTAATA--EPRADSIVYYLKGFELANSRFGHHSFLPGVFGVTADVHEAAYAQ----NQALFLAGIGMPPATFTKAQLATATYALMRRYDIS-----ERTCHFAITTIGHMVAQTAVRDL---NNPLPFRVNLSPFLVQ |
4 | 2f9zC | 0.15 | 0.07 | 2.43 | 0.93 | FFAS-3D | | --------KVIGIGEYAVMKNPG----VIVTLGLGSCVAVCMRDPVAKVGAMAHVMLPDSDTAVKTLVEELKK--MGAKVERLEAKIAGGASKGMNIGARNVEAVKKHLKDFGIKLLAEDT-----------GGNRA--RSVEYNIETGKLLVRKVLE----------------------------------------------------------------------------------------------------------- |
5 | 2f9zC | 0.13 | 0.07 | 2.35 | 0.84 | HHpred | | ----AHMKKVIGIGEYAVMKN----PGVIVTLGLGSCVAVCMRDPVAKVGAMAHVMLPDSDTAVKTLVEELKKMGA--KVERLEAKIAGGFESGMNIGARNVEAVKKHLKDFGIKLLAED--TGGN-------R----ARSVEYNIETGKLLVRKVLEI---------------------------------------------------------------------------------------------------------- |
6 | 3a79B | 0.14 | 0.13 | 4.37 | 0.62 | MUSTER | | AHLHLSCILLDLVSYESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLND--ENCQRLMTFLSELTRGPTLLNVTLQHI-------ETTWKCSVKLFQFFWPRPEYLNIYNLTITERIDREEFTYSETALKSLMIE----HVKNQVFL--FSKEALYSVFAEMNIKMLSISDTPFIHM-VCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQ--GL-KNFFKVALMTKNMSSLETLLNSHAY-----DRTCAWAE |
7 | 2f9zC | 0.14 | 0.07 | 2.32 | 0.79 | CNFpred | | ----AHMKKVIGIGEYAVMK----NPGVIVTLGLGSCVAVCMRDPVAKVGAMAHVMLPYADTAVKTLVEELKKM--GAKVERLEAKIAGGASM-MNIGARNVEAVKKHLKDF--GIKLLAEDTGG-----------NRARSVEYNIETGKLLVR--------------------------------------------------------------------------------------------------------------- |
8 | 1vt4I3 | 0.11 | 0.06 | 2.19 | 0.68 | HHsearch-2 | | -----------------------------------------------------EYALH------RSIVDHIPKTFDSDDL-------IPPYLDQY-----FYSHIGHHLKNIEHP-ERM--------T----------------------LFRMVF--LDFRFLEQKIRHDSWNASGSILNT---LQQLKFYKCDNDPKYERLVN---AILD----FLPKIEENLICSKYTDLLR-IALMAEDEAIFE-EAHKQVQRGGGGGGGG |
9 | 1a7tA | 0.11 | 0.08 | 3.01 | 0.57 | Neff-PPAS | | -------------DDISITQLSDKVYTYVSLAEIVPSNGMIVINNH----QAALLDTPINDAQTEMLVNWVTDSLH----AKVTTFIPNWHGD--------CIGGLGYLQRKGVQSYANQMTIDLAKEKGLPVPEHGFTDSLTVSLDGMPLQCYYL----------GGGHATDN--IVVWLPTENILFGGCMLKDNTTSIGNISDADVTAWPKTLDKFPSARNYGGTELIEHTKQIVNQYIESTS-------------------- |
10 | 5cerA1 | 0.14 | 0.07 | 2.45 | 0.41 | HHsearch | | ---------------------------------------------------------------------RHKVLLTPTANGSMDLHVEGSRDPI--FGRNLSYFLISELNRMKVTIENLTF---DENFLLDWAEESPRIGGVTPRYETIEQQAESF--STAINRAYSKL-RERATKAKVFMLEKPTIEVRNISFLPKNNY--------------------KKDK--------------------------YTGSVVLQSA----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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