Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | SRTLSGADAINALRPFYFAVHPDFFGQHPKEREVNENSLKRLNGYLENLQKPGFRSFKPTQLTFYVREREPNSSNVQESFSASGFRAVSFTLHTRDLLSTVLDILNSCSL |
1 | 4j80A1 | 0.17 | 0.15 | 4.76 | 1.10 | MUSTER | | PRNATQEEIKRAYKRLARQYHPDVNKS-----PEAEEKFKEINEAYAVS-DPEKRRIYDT-----YGTTEAPPPPPPGGYDFSGF-------DVEDFSEFFQELFGPGLF |
2 | 2dmxA | 0.23 | 0.15 | 4.85 | 1.03 | Neff-PPAS | | QASASPEDIKKAYRKLALRWHPD---KNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAGGGASGPSSG-------------------------------- |
3 | 5aiwA | 0.12 | 0.11 | 3.87 | 0.93 | SPARKS-K | | -SNTNQSESEKIIKEFYKTVYN--YEKS--QKEITDNVYQELQNEINVNNSYSPQQNTIQKSSV---NENEIKILAYESKDNSQQYLVTAPIHQVFNGTKNDFEINQLIQ |
4 | 3ag7A | 0.15 | 0.07 | 2.45 | 0.71 | FFAS-3D | | MDMIEGNAVRKSYQRALLILHPDKLQQSANQKYMAEKVFELLQEAWDHFNTLG--------------------------------------------------------- |
5 | 2qsaA | 0.19 | 0.09 | 2.94 | 0.54 | HHpred | | NREFDKQKLAKAYRALARKHHPDRVK-NKEEKLLAEERFRVIATAYETLKDDEA-------------------------------------------------------- |
6 | 2dmxA | 0.21 | 0.15 | 4.61 | 1.03 | MUSTER | | QASASPEDIKKAYRKLALRWHPD---KNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRA-----GCDSWRAGGGASGPSSG--------------------------- |
7 | 2hgsA | 0.10 | 0.09 | 3.34 | 0.56 | CNFpred | | ------YAVQMDFNLLVDAVSAAFLEQTLSSTIKQDDFTARLFDIHKQVLKE--GIAQTVFLGLNRSDYM----FQRSADGSPALKQIEINTI-GGLASRTPAVHRHVLS |
8 | 3ag7A | 0.15 | 0.07 | 2.45 | 0.67 | HHsearch-2 | | MDMIEGNAVRKSYQRALLILHPDKLQQSANQKYMAEKVFELLQEAWDHFNTLGP-------------------------------------------------------- |
9 | 1fpoA1 | 0.17 | 0.10 | 3.29 | 0.99 | Neff-PPAS | | RYQLDTQALSLRFQDLQRQYHPDKFASGQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGF--------------------------------------------- |
10 | 1fpoA1 | 0.18 | 0.11 | 3.54 | 0.82 | HHsearch | | PAQLDTQALSLRFQDLQRQYHPDKFASGSQEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH-------------------G-F------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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