Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MKKCFLFIFMCLFIFSANAELKFRPEIENKKIYFQGKVTDYTLNDFIFFGDSREPFYGSENDDYTATADEWLRFYAELPDVRKWQRVVPDDFSMMSGAPWCDIQFFEQENDHSVITGSEHTRCIDFLVTPKRKGLIPMGTKGTLLDYGSYLAFAPQIEH |
1 | 5fjlA | 0.11 | 0.09 | 3.18 | 0.61 | SPARKS-K | | ----------------VSYSDGHFLTKSGGVINFRTRVTSITITILGNYGLRVVNG-ELQNTPLTFKGADF-----KSSTLKDELLIPLEQLNTAPSTALCIFITYRELCMMQFLTDVDKTPFLVVLRSESKHETI---QYMHIVTVHPFLSL------ |
2 | 3u07A1 | 0.10 | 0.07 | 2.59 | 0.36 | FFAS-3D | | -EDAYIYGYSIDEAYKFFYHTAVENN------------------------YPLNEFQPTINNDHLGWLD---------VAAEPVIVSVPD-----DEGRYWILHTDGHYTNAAFSSRTRGTKGGQFFAAQDWQGEVPASVDEVVRVDSNLVKLG----- |
3 | 3pieA3 | 0.19 | 0.14 | 4.67 | 0.36 | HHpred | | ----------------------------GSKVVFEATVDGYNSETVKKGSLRAEPNIGKVRAKLDSQALRFYPTGGGGKTVADWLSEARKPFVVVSSSEQKKLAKVPREASSYVLLRSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTSI--------- |
4 | 5wqfA | 0.17 | 0.14 | 4.55 | 0.61 | MUSTER | | PTREDLVATAKLFIAKYNE----TPE----------SIISVRTPNSVSH-------RLFPTRNATRNIGESMEACANAKEVFKSLTVSVIDDNDTIVDERTRKVVFYLASRGDTIVGEWKSECIFIFQ---SED----GKL-AGFDTAYMDEFESRLDG |
5 | 2x0oA | 0.17 | 0.05 | 1.65 | 0.60 | CNFpred | | LERYVDAYLTPLIHCFYAHDLVFMPHGENVILVIQDVPVRAFMKDIA---------------------------------------------------------------------------------------------------------------- |
6 | 3p56C | 0.18 | 0.09 | 2.86 | 0.38 | HHsearch-2 | | AVPATLHLLPCEVAGPAPVGRFFTPGPEGLEVSFRGRGATANFSRFTLWGLETIP---GPDAKV-RGALTWPSLAAAIHAQ------------------------------------------------------------------------------ |
7 | 5w5pA3 | 0.08 | 0.07 | 2.71 | 0.63 | Neff-PPAS | | TEDCSAQVQKAVDVSYGRVWFGNADRSFKTPVGLPT-NSIV--GDLEICGDG--ARVWVYSNTGIFTSKRSIGL-ETSTDDLYTAALEIGRGLRFQGDGVSQSVVVNGDRLYNVNKGGRYLRISALVRATQPRRNETTGY------------------- |
8 | 3pieA3 | 0.15 | 0.14 | 4.66 | 0.50 | HHsearch | | ---------LPINKEFPKGSKVVFLGDYAYG--GEATVDGYNSETVKKGSLRAEPNIGKVRAKLDSQALRFYPTGGGGKTVADWLSEARKPFVVVSSSEQKKLAKVPREASSYVLLRSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTSIIQVLEIIA- |
9 | 5ltvA | 0.10 | 0.09 | 3.50 | 0.66 | SP3 | | IQSWLEGRMHLVEGLASQLALLDQPDEANIARQLEQPVFSRNFASVYLGEAASGTFTDAMPEGYDPRTRAWYKDALAADRL----IVTEPFVDAGTGEQAMSLPVRHASLGYAFLVSDAG----KILLHPDSGYPAPNIVPGVHEVSSQFVSFTPVKGL |
10 | 3cvzA2 | 0.05 | 0.04 | 2.06 | 0.62 | PROSPECTOR2 | | IITNQADAEAIVTKLNSLNEKTLIDIATK--------------DTFGMVSKTQDSEGKNVAATKALKVKDVATFGLKSGGSEDEMKAGAVEDKYGKVGDSTAGIAINLPSTGLEYAGKG---TTIDFNKTLKVDVTGGSTPSAVAVSG----FVTKDDT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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