Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | IQHCKEKSDWTKLGALYVNARTGCEHFDDLQKLSSCIAETLTRDSETDRPRVPFCDFADAVIKNSQHNEADRIFIGRIGISVMYSYHKVLQWIKGRKVLDKLHELQIHFTVLKGLTGAERLASRCQIVNKAAEIFLKTGSLDGATWVLRESEWTINAPLWPCDKMDILNRHNLLCT |
1 | 5cwbA | 0.08 | 0.08 | 3.13 | 0.81 | SPARKS-K | | ---DECEEKARRVAEKVERLKRGTSEDEIAEEVAREISEVIRTLKESGSSYRIVAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKESGSYEVICECVARIVAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKESGSYEVIKECVQRIEEIVEASGTSEDNEIVRRVKSEVER |
2 | 4gyoA2 | 0.14 | 0.11 | 3.85 | 0.87 | FFAS-3D | | --------EAYMIAAAYYNVGHCKYSLGDYKEAEGYFKTAAAIFEEHNFQQAVVFSLTHIYCKEGKYDKAVEAYDRGIKSAIHELYLGSGDLNVLTECFDLLESRQLL-------------ADAEDLLHDTAERFNQLEHYESAAFFYRR-------------LMNIKKKLA---- |
3 | 5iwwD | 0.16 | 0.13 | 4.37 | 0.35 | HHpred | | LKACARLGALELGKQIHGYVIKSGFEGNVVDMYSLEEARKVFDEM-PEKDVVTYNTLIDGLCKAGKLDEALKLFEEEKGSSVLKACARLGALELGKQIHGYVIKSGF--------------ESNVVVYNALIDMYSKCGLLEEARKVFDEMPE-------K----DVVTYNTLI-- |
4 | 2h7oA1 | 0.11 | 0.10 | 3.69 | 0.69 | MUSTER | | ITPKKLRELSDLLRTHLSSAATKQLDMGGVLSDLDTMLVALDKAEREVDKDQ-LKSFNSLILKTYREDYVKGNFMLSIVEPSLQRIQKHLDQTHSFSDIGSLVRAHKHLETLLEVLVTLSQPVSSETYGFLNRLAEAKITLSQQLNTLQQ------------QQESAKAQLSILIN |
5 | 6epcP | 0.11 | 0.10 | 3.52 | 0.75 | CNFpred | | VKMCYEAKEWDLLNENIMLLSKRSQLKQAVAKMVQQCCTYVEEITDLPVK-LRLIDTLRMVTEG----IYVEIERARLTKTLATIKEQNGDVKEAASILQELQV---------ETYGSMEKKERVEFILEQMRLCLAVKDYIRTQIISKKINTKFF--QEENTEKLKLKYYNLMIQ |
6 | 5iwwD | 0.16 | 0.15 | 5.07 | 0.53 | HHsearch-2 | | IDGLCKAGKLDEALKLFEEMVEKGIKPDE-FTFSSVLGKQIHGYVIKSGGNVVYNALIDMYSKCGLLEEARKVFDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIDEFTFSSVLGASGFESNVVVYNALIDMYSKCGLLEEARKVFDEMP-----------EKDVVTYNTLIDG |
7 | 5cwhA | 0.10 | 0.09 | 3.19 | 0.70 | Neff-PPAS | | -----DSEEVNERVKQLAEKAKEATDKEEVIEIVKELAELAKQS-TDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEAT-------------DKELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEATDKELVEHIEKILEELKK |
8 | 5i9dA3 | 0.16 | 0.06 | 2.09 | 0.52 | HHsearch | | --------------------------------------------------------------------------DVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP--------------DVVTYSTLIDGLCKAGKLDEALKLFEEMV---EKGIKP--------------- |
9 | 5cqrA2 | 0.08 | 0.07 | 2.90 | 0.74 | SP3 | | GEHLMQEHMYEPAGLMFARCGATCGNWKQALCVAAQL-----NFTKDQLVGL-GRTLAGKLVEQRKHIDAAMVLEECAYEEAVLLLLEGAAWEEALRLVYKYNRLDIFLDSQTATFVVQNTENLKDEVYHILKVLFLFEFDEQGRELQKAFERSNRRTQWKLSLL----------- |
10 | 5h7cA2 | 0.09 | 0.07 | 2.79 | 0.67 | PROSPECTOR2 | | ----TDKEEVIEIVKELAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQ--STDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVN------------EIVKQLEEVAKEATDKELVEHIEKI-------------LEELKKQ-----S |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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