>PF14656 (555 residues) QLLSLLLSVWLNKEKDILKCPDAVSHLHTLLSTLSSMKGAVDESWDGQCVSPWWQQVRTA CVQSESSAAALLAALVAHRVAKNAITRLAESKFQEWECVSLELEQWMVCIKQLEDVLALQ TLLCLPSPQGPTGGSVTRCSVKTLLESGRGGVADCVSKLLFRQGVSPDLLRDILQRRGEN EPTQQPAQPGGEEKLEELLECVCQRFPNSLSPDVLFAHCSWENVVQWNKDPEVGQYLEWS VEFLKMISSPHIQLGVSAMMWQTFIVKRFSAAAFLMEKVGKAPKDRLCRRDVGMGDAAVR SFLGSCVQLLQTLMEADSAVEEVSAPDVCVEEVWGGAEGPVSIVELALDQRSVHYPLVQH HCVLASLLHATMTFCLRLKPLSLFDSKGKNAFFRDLSSIQLLPSGDTDPSLVAVRQEFLM NVLTGWVKVLAESEENGVKHSGAEDMWPSVCMELSSLLQVNTDILRRHLVCELYNQGLDL RAEEVMMEVQDKDVLGSQLLVLIGQRLAFSLLHSQSQTKPNMELLARLPPTLCTWLKAMD PSELRCPSVPLSQSS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | QLLSLLLSVWLNKEKDILKCPDAVSHLHTLLSTLSSMKGAVDESWDGQCVSPWWQQVRTACVQSESSAAALLAALVAHRVAKNAITRLAESKFQEWECVSLELEQWMVCIKQLEDVLALQTLLCLPSPQGPTGGSVTRCSVKTLLESGRGGVADCVSKLLFRQGVSPDLLRDILQRRGENEPTQQPAQPGGEEKLEELLECVCQRFPNSLSPDVLFAHCSWENVVQWNKDPEVGQYLEWSVEFLKMISSPHIQLGVSAMMWQTFIVKRFSAAAFLMEKVGKAPKDRLCRRDVGMGDAAVRSFLGSCVQLLQTLMEADSAVEEVSAPDVCVEEVWGGAEGPVSIVELALDQRSVHYPLVQHHCVLASLLHATMTFCLRLKPLSLFDSKGKNAFFRDLSSIQLLPSGDTDPSLVAVRQEFLMNVLTGWVKVLAESEENGVKHSGAEDMWPSVCMELSSLLQVNTDILRRHLVCELYNQGLDLRAEEVMMEVQDKDVLGSQLLVLIGQRLAFSLLHSQSQTKPNMELLARLPPTLCTWLKAMDPSELRCPSVPLSQSS | |||||||||||||||||||
1 | 3nowA | 0.12 | 0.11 | 3.75 | 1.01 | SPARKS-K | LGVPWFMRVLDQKHENC--VSTAQFCLQTILNALSGLKNKPDSKPDNREIDTLLTCLVYSITDRTISGAARDGVIELITRNVH----------------YTALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGSCLARIYENMYYSKVRVTVAITALLNGPLDVGNQVVAR----------------EGILQMILAMATT-----DDELQQRVACECLIAASSKKDKAKALCEQGVDILKRLKNDGIRVRALVGLCKLGALKLAEACRRFLIKPGKTLDAECKEKLIED-KASIHALMDLARGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEINKRITVLNEGITTALCALAQELIARVLNAVCGLKELRGKVVQEGGVKALLRMALE--------GTEKGKRHATQALARIGITIPEVSFSG-----------QRSLDVIRPLLNLLQQDCTALENFESLMALTNLMNESVRQRIIKVSKIEYYLMYLTRAAAQCLCNLV-----MSEDVIKMFEGNNKFLALLCEDEDEETATACAGALAIIT | |||||||||||||
2 | 2x1gF | 0.10 | 0.08 | 3.10 | 1.50 | FFAS-3D | SCSTMALAFWVFAHKCWEYIKPLYAHLTRILVRKSEQPDEKSLAKDLECFRCYRQDISDTFMYCYDVLNDYILEILAAMLDEAIADL--QRHPTHWTKLEACIYSFQSVAEHRQIPRLMRVLAEI-------PYEKLNVKLLGT-------ALETMGSYCNWLMYIPPAINLLVR----------GLNSSMSAQATLGLKELCRDCQLQLKADPLLNACHASLNTGRMKNSDSVRLMFSIGKLMSLLRPEEIPKYLDIIVSRIRTIFRLNMISTLFSSLNT-PVLLVMQRTMPIFKRIAEDVLEAACSAMKHAITNLRSQPMLQ-----------------DLCLFIVASFQCCAPTLE-------ISKTAIVMFFKPLMQQLLREFIQHSF--KLFESTPEQNFSNISDTMETFFGCLTQIIKKIPQVL-------EDKTLAYDRLVFYAQRGMTLPESGAIRNSIQFLTHFVMQSRNAHVTEVVLAT--GEQTLYTAMMCVGDKFADIL----------LAMNRKYAAEMAVWMKSMSTPNFPTQLITDAD-- | |||||||||||||
3 | 1vt4I | 0.13 | 0.10 | 3.51 | 0.28 | HHpred | -TLR-LFWTLLSKQEEMVQKFEELRINYKFLMSPIKTEQRQVFAKYNVSRLQPYLKLRQALLELRPAGKTWVALDVCLSYKVQCKMDFKIFKDPNWTSRSDHSSNIKLRIHSIQ--AELRRLLKSKPYENC-LLVLLNVQNAKAWNACKILLFKQVTDFLSAATLTPDEVKSYLDCRPQDLPREVL--TTNPRRLSIIAESIRDGLAT--WDNWKHVNCDKLTTIESSLNVLEPAEYRKMFDRLSVFPPAHIPTILLSLIWFDVIKSDVMVVVNKLHKYEKQPKES----TISIPSIYLE----LKVKLENEYALHRSIVDHYNIPKFDSDDLI-----PPYL---------DQYFYSHIGHHLKNIE---HPERMTFRMVFL-----DFRFLEQKIRHDSTAWNA--SGSILNTLQQLKFYK----PYICDN-------DPKYERLVNAILDFLPKISKYTDLLRIALMA------EDAIFEEAHKQVQRG--------------------------------------------------------------- | |||||||||||||
4 | 2z6gA | 0.12 | 0.11 | 3.99 | 0.95 | MUSTER | QMLKHAVVNLINYQDDADEDQVVVNKAAVMVHQLSKKEASRHAIMRS---PQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPAL-VNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNPAIVEAGGMQALGLHLTD-PSQRLVQNCLWTLRNLKQEGMEGLLGTLVQLL--INVVTCAAGILSNLTCNN-YKNKMMVCQVGIEALVRTVLRAEDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKLL--HPPSH---WPLIKATVGLIRNLALCPANHA--PLREQGAIPRLVQLLVRAHQDTQRRTSQFVEGVRMEEIVEACTGALHILARDIH-----NRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHEGVATYAAAVLFRMSEDKPQ--DYKKRLSVELTSSL------------------- | |||||||||||||
5 | 4gmxC | 0.09 | 0.07 | 2.84 | 1.49 | CNFpred | EIMISKLARQIDG------SEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKGKDNKAVVASDIMYVVGQYPRFLKA-----HWNFLR---TVILKLFEFMHQDMACDTFIKIV-----------QKCKYHFVIQQEPFIQTIIRDIQTTADLQPQQVH----------------------TFYKACGIIISEERSVAERNRLLSDLMQLPNMAWD-DSETVKIIANIIKTNVAVCTSMDFYPQLGHIYYNML-QLYRAVSSMISAQVAAEGLIATKTP---KVRGLRTIKKEILKLVETYISKARNLDD------VVKVLV------EPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIQGVILILQSVFECTLDMINKDFT-----EYPEHRVEFYKLLKVINEKSFAAFLEL---------PPAAFKLFVDAICWAFKHNNRDVEVNGLQIAL------DLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDDHKSGFSKQALLLMKLISLVYDN---KISVPLYQEAEVP | |||||||||||||
6 | 1vt4I | 0.12 | 0.10 | 3.57 | 1.25 | HHsearch-2 | ------------MDF------ETGEHQYQYKDILSVFEDVDNVQDMPKSILS-KEEIDHIIMSKDAV----------SGTLRLFWTLLSKQ--EEMKFVEVLRINYKFLMSPIKTEQNRQALLELRP--------AKNVLIDGVLGSGKTWVALDVCLWLNKNCNSPETVLEMIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN---CLLVLLNVQNAKAWNAFNSCTTRFKQVTDFLSAATTTSLDHHSM-TLTPDEVKSLLLKY------LDCRPQD-LPREVLTTNPRRLSNWKHVNCDKLTTIIESSL--NVLEP--AEYRKMFDRFPAHIPTILLSLIWDVIKSDVM-------VVVNKLHKYSLVPKESTYLELKVKLALHRSIVDHYNIPFDSDDLIPPYLDQYFYSHIGHHLK-NIEHPEMTLRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYICDNDPKYERLVNAILDFL----------PKIEENLICSKY---TDL-LRIALMDEAIFEEAHKQV-----------QRGG | |||||||||||||
7 | 5lj3T | 0.08 | 0.08 | 3.00 | 1.32 | Neff-PPAS | KQIRWLYERFCSQFVTDTSIWEDYIRWESETSRIFWLFQRCLKSCVRDCDRICLSYLELAIEMIRHALASSLMKMEMHRKVWDPVIKFVEEKVESTDEAELINVLLVKGFTIWSSHILERYQQKRNESLATLALTRNITIKSVYEKYLLNFNYLASLEKLGDNQY-EEFMRQMNGPDKWLFLSLAKYYIGRLDSCGDLLKKSLQQFDRIYNFYLLFEQECSQFILGKLKEDDWTEKLQAHMATFESLINLYDIYLNDVALRQDSLVETWMKRVSLQKSAAEKCNSEAILKIDPRKVGTPGSFGRLWCSYGDLYWRSNAISTARKLWTQSLKVPYPYIEDLEEIYLNWADRELDHVPTNPEILLSLRIWSKYIDYLEAENFALFLQNYEVMESFQVYEKTIPLFPPEIQYELWIEYLEVATSHPEHIRFLFEKALKNLCSNGIDCKTIFIAYSVFEERSKAVIGLESRLQLWRMCISKAESVTRELYQECIQILEFVIKFSDFESRAREILAYGAKLN------------TELWDSFEIFELK------------- | |||||||||||||
8 | 1vt4I | 0.11 | 0.09 | 3.26 | 1.15 | HHsearch | AVSGTLRLFWLSKQEEMVQFVEELRINYKFLMSPIKTEDNQVFAKYNVSRLQPYLKLRQALLELRPAGKTWVALDVCLSYKVQCKMDFKIFIDPNWTSRSDHSSNIKLRIHSIQA--ELRRLLKSKPYENC-LLVLLNVQNAKAWNAFKILLFKQVTDFLSAMTLTPDEVKSLLLKYLDCRPDLPRELTTNPRRLSIIAESIRDGLAT---WDNWK-----------HVNCDKLTIIESSLNVLSVFPPAHIPTILLSLIWFDVIKSDVMVVVNKLHKYEKQPKES----TISIPSIYLE----LKVKLENELHRSI--VDHYNIPTFDSDDL-----IPPYLDQYFY------SHIGHHLKNIEHPER------MTFRMVFL-----DFRFLEQKIRHDSTAWNA--SGSILNTLQQLKFYKPYICD----N-------DPKYERLVNAILDF----------LP--KIEENLICSKYTDLLRIALMAEDEAIFEE-AHKQV-QR------GGG--GGGGGGG-GGGGG----------GGGGGGGGGGGGGG- | |||||||||||||
9 | 2bkuB | 0.10 | 0.10 | 3.63 | 1.40 | PROSPECTOR2 | EFAQLLENSILSPDQNIDNFLQFAGLSSQVLITLKNELVSKDSVKTQQFAQRWKNQIKTNALTSIEPRIANAAAQLIAAIADIELPHDNTGAEQPENVKRASLLALGYMCESSNNILAIVQGAQSTETSKALIFIKNNMEVCEATQAEDIEVQAAAFGCLCKKSPNDKEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPSMSAGACLQLFAQNCG-NHILEPVLEFVEQNITADNWRNREAAVMAFGKVQRTYYVHQALPSILNLMNDQSLQVKETESIDPQQHLPGVVQACLIGLWTIINLVEQLAEATPSPIYNIGAANRIDNEFNARASAFSTDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQEAAVIRKSPSSVEPVAKKDSAFIEDDVFYAISALAASLGKGFEKYLETNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPYLNDIMALCLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAEDPQLKRTRSGQLFSQATL | |||||||||||||
10 | 5x6oG | 0.10 | 0.03 | 1.27 | 0.19 | SAM | --------------------------------------------------------------------------------------------------------------------------------------------LLHQIIGADLSTIEILNRLKLDYEFKFKNF-----------------VIAKGAPIGKSIVSLLLRCKKTLTLDRFIDTLLEDIAVLIKEISVHPNESKLAVPFLVALMYQIVQFRPSATHNLA-LKDCFLFICDLIRIYHHVLKVPIHESNMNLHVE----FISYSFDLLEGILRVLQSHPKQTYMEFFDENILKSF--EFVYKLALTYKPMVNV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |