>PF14655 (419 residues) WLQDCVVSLSPCADLLVVAREQKAAFLSAKWRTDDSGREEMTLGVSWTGTLSTEEGECVS STICIPLASQKRSSTGRPDWTCVVVGFTSGYVRFYTESGVLLLAQLLHEDPVLRLKCRTY EIPRHPGVTEQHEELSILYPAAMVTIDGFSLFQSLRACRNQVARAAAAGNDVIQPPPLAY KKWGLQEMDTIVDHSSVGIMTLCVFDQMKNASILGGFNASVKGSPPAMSQYVTVGSGPYT GFYYAIEGSSQPLLSHVAMAVASKLTSALFSAASGWLGWNKNKNEEEAPQKQKPKVEPAT PLSIRFGLPDSRRHGESICLSPCNTLAGVTDDFGRVTLLDLARGIAIRMWKGYRDAQLGW LQVPEERSERDLSPSASLPRRHALFLIIYAPRRGILEVWAMQQGPRVGAFTVGKHCRLL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | WLQDCVVSLSPCADLLVVAREQKAAFLSAKWRTDDSGREEMTLGVSWTGTLSTEEGECVSSTICIPLASQKRSSTGRPDWTCVVVGFTSGYVRFYTESGVLLLAQLLHEDPVLRLKCRTYEIPRHPGVTEQHEELSILYPAAMVTIDGFSLFQSLRACRNQVARAAAAGNDVIQPPPLAYKKWGLQEMDTIVDHSSVGIMTLCVFDQMKNASILGGFNASVKGSPPAMSQYVTVGSGPYTGFYYAIEGSSQPLLSHVAMAVASKLTSALFSAASGWLGWNKNKNEEEAPQKQKPKVEPATPLSIRFGLPDSRRHGESICLSPCNTLAGVTDDFGRVTLLDLARGIAIRMWKGYRDAQLGWLQVPEERSERDLSPSASLPRRHALFLIIYAPRRGILEVWAMQQGPRVGAFTVGKHCRLL | |||||||||||||||||||
1 | 5teeA2 | 0.12 | 0.09 | 3.23 | 1.07 | SPARKS-K | GGFAYSLAFSVDIGSLAIGVGDG-MIRVWNTLSIKNNYD--------VKNFWQGVKSKVTALCWH--------PTKEG---CLAFGTDDGKVGLYDTYSPPQISSTYHKKTVYTLAWGPPVPPMSLGGRPSLALYSCGGEGIVLQHNPWKLSGEAFDINKLIRDTNSIKYKLP-----VHTEISWKADGKI--MALGNE---------------DGSIEIFQIPNLKLICTIQQHHKLVNTISWHHEHGSQ-------------------PELSYLMSNNAVNLKTVIESSPESPVTITEPYR---TLSGHTAKITSVAWSPHHDLVSASYD-GTAQVWDALREEPLCNFRGHQG-RLLCVAWSPLDPD----------------CIYSGADDFCVHKWLTSMQDHSRPPQ-------- | |||||||||||||
2 | 3jctx | 0.13 | 0.11 | 3.63 | 1.20 | MUSTER | TIL--CSAFAPHSSRMVTGAGDNTARIWDC----DTQTPMHTL---------KGHYNWVLCVSW-------------PDGEVIATGSMDNTIRLWDKSGQCLGALRGHSKWITSLSWEPI----HLVKPGSKPRLASSSKDGTIKIW-RVCQYTMSGHTNSVSCVKWGGQGLSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPST----------------------------------PEEAQKKALENYEKICKKNGNSEEMTASDDYTMFLNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVA----SVYQVAWSSDCR--------------LLVSCSKDTTLKVWDVRTRDEVYTVDWSVDGKRV | |||||||||||||
3 | 5amsA | 0.13 | 0.08 | 2.89 | 1.79 | CNFpred | --SVISCSFTSEGGFLVTADMGKVLVHMGQK-------GGAQWKLASQMQE----VEEIVWLKTHPT-----------IARTFAFGATDGSVWCYQINGSLEQLMSGFQQDCSMGEFINTD------KGENTLELVTCSLSTIVAWNCFT--------------------------GQQLFKITQGLEAPWISLSLAPETL------------------------GNSGVVACGSNNGLLAVINCN-----------------------------------------------------NGGAILHLSTV-DASIESISWSSKFSLMAIGLVCGEILLYDTSAWRVRHKFVLE--DSVTKLMFD------------------NDDLFASCI-NGKVYQFNARTGQEKFVCVGHNMGVLD | |||||||||||||
4 | 5teeA2 | 0.11 | 0.09 | 3.25 | 1.79 | Neff-PPAS | --FAYSLAFSSDIGSLAIGVGDGMIRVWNTLSIKNNY---------DVKNFWQGVKSKVTALCWHP-----------TKEGCLAFGTDDGKVGLYDTYSPPQISSTYHKKTVYTLAWGPPVPPMSLGGRPSLALYSCGGEGIVLQHNPWKLSGEAFDINKLIRDTNSIKYKLP-----VHTEISWKADGKIMALGNE-----------------DGSIEIFQIPNLKLICTIQQHHKLVNTISWHHEHGSQPELSYLMASGSNNAVIYVHNLKTVIESSPES---------------PVTITEPYRTLSGHTAKITSVAWSPHHGRLVSASYDGTAQVWDALREEPLCNFRGHQGRLLCVAWSPLDP-----------------DCIYSGADDFCVHKWLTSMQDHSRPPQ-------- | |||||||||||||
5 | 1fwxa2 | 0.07 | 0.06 | 2.45 | 1.24 | PROSPECTOR2 | ALDDYYGFWSSGQSILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSHDNGDLHHVHMSFTEGKYD------GRFLFMNDKANTRVARVCDVMKCDAILEINAKGIHGLRPTPLVNDGTNMEDVAYVNVFTAVGKWAFSTSYNSEKGMTLPEMTAIAEIEKAIAAGDYQELNGVKVVDGRKESLFTRYIPIANNPHG-----------------CNMAPDKKHLCVAGKLSPTVTVLD---------VTRFDAVFY-----------------------------------ENAPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNEKVDPIKDKLDVHYQPGHLKTVMGETLKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPTFAEAIAVHPSILSDIK | |||||||||||||
6 | 4wjsA | 0.15 | 0.12 | 4.03 | 1.18 | MUSTER | KVHAVSCQFSPSSSRLATGSGDNTARIWDT--------DSGTPKFTLKG-----HTGWVLGVSW-------------PDGKYLATCSMDTTVRVWDESGKQVNQEFGHAKWVLALAWQPYHL-----WRDGTARLASASKDCTVRIWLVNTEHVLSGHKGSVSCVKWGGTDLTGSHDRSVRVWDAVKGTLVHNFT----------------------------AHGHWVNHIALSSDHVLRTAYHDHTKEVPGTEEERRAKAKERFEKAAKI-----KGKVAERLVSASDDFTMYLPTNNGSKPVARLLGHQNKVNHVQFSPDGTLIASAGWDNSTKLWNARDGKFIKNLRGHVA----PVYQCAWSADSR--------------LVVTGSKDCTLKVWNVRTGDEVYAVDWAADGELV | |||||||||||||
7 | 5l8eA | 0.10 | 0.06 | 2.37 | 1.71 | CNFpred | --GVNALQLDPALNRLFTAGRDSIIRIWSVN-----QHKQDPYIASMEHH-----TDWVNDIVLCCN------------GKTLISASSDTTVKVWNAKGFCMSTLRTHKDYVKALAYAK-----------DKELVASAGLRQIFLWDVNTLTALT-----------------ASNNTVTTSSLSGN-KDSIYSLAMNQL----------------------------GTIIVSGSTEKVLRVWDPR------------------------------------------------------TCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVND-----------------AFTHVYSGGR-DRKIYCTDLRNPIRVLICEEKAPVLKM | |||||||||||||
8 | 5oqlO3 | 0.10 | 0.09 | 3.21 | 1.66 | Neff-PPAS | --PVTSISFRTDGVMATATSVSGDVTFWDLNKGGR-----IMGVLRSAHNPPSRHNIVRGGISKIEFL---------AGQPVIVTSGLDNSLKTWIPVPRILHQRSGHAAPVRCLHFLPSDFDGAEGGN---KWLLSGGKDRSLWGWSLRRDGQSAELSQGAIRKKARKMGLLAGTTTLEDLKAP------EITCIASSLNRDGGMGAIPGKQMIWDKNAELSGNTGWESVVTAHKDDPYARTWFW-GRRRAGRWAFKTGDGEPVSTVAISSCGTFALVGSTGRHRQRFPSRFAPGTGFITGNLVDEIDWAMTKIIGCRYHPGNDLIAFACDDRSIRVVDIETKNTIREFWGCRGDINDFCFSPDGR------------------WIVAASQDSIIRVWDLPTAHLIDAFRLEQPCTAL | |||||||||||||
9 | 6e29D | 0.11 | 0.08 | 2.75 | 1.20 | PROSPECTOR2 | ITNTTCVRFNRKGDFLASGRVDGTVVI---WDLETM-----GVARKLRG-----HSKNITSLSW------------SRCGRYLLSACQGWKVILWDLQDGKRYREVRFRAPVYGAELH----------PWNHHQFAAALFEDQPML------------------------------------VDITEPVEVRYVLPSVPKQ---------AKEDAKHMTTAIVYTASGDHLLAGTTKGRLNIIDARTREIIYSEKIASGIITT-------------LRLTESGREIVPNLSAADLDPIQLPLEHKFQDVVNRLSWNHVAFSATGEVAASTYNNHELYIWERGHGSLVRMLEGPKEEVIEW-------------------HPHRALLAACGLETGRINIWSVT----------------- | |||||||||||||
10 | 4nsxA | 0.13 | 0.12 | 4.07 | 1.16 | MUSTER | ETDANVEHLCIFGDYLCASTDDNSIFIYKKSDPQDKYPSEFYTKLTV----TEIQGGEIVSLQKLTVVTKSNTAEPAPVLDIIALGTVTGEVIMFNRKGKRIRTIKIPQSRISSLSFRTDGSS----------HLSVGTSSGDLIFY-HVLKNIHRESYGGVTQATFLNGQPTSGGDNSLKEYVFDPQPPRYLRSRGGHSQPPS---------------YIAFADSQSHFMLSASKDRSLWSFSLRKDAQSQEMSQ----KFPEIVALAIENAR---IGEWENIITAHKDEKFARTMRNKRVGRWTFDTTDDGFVKSVAMSQCGNFGFIGSSNGSITIYNMQSGILRKKYKLHKRAVTGISLDGMNRNKSTLLGKLKLDAPMVYHLFALALDDLSIVVIDAVTQNRITAFDFSPEGRWI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |