Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LWLCEQAPRCGGRIYNPLERCCDYGIIEPLNLTRHCGPRCTFWPCFELCCPESYNSQRVYVVRLKVRGAKSRCTSSPISRFC |
1 | 1wktA | 0.18 | 0.15 | 4.77 | 1.12 | SPARKS-K | | LIMCK--------NCDPNTGSCDWK--QNWNTCVGIGANVHWMVTG-----GSTDGKQGCATIWEGSGCRSTTMCCPANTCC |
2 | 1n7dA3 | 0.17 | 0.16 | 5.23 | 1.02 | MUSTER | | DKVCNMARDCRDWSDEPIKECGTNE----LDNNGGCSHVCNDLKIGYECCPDGFLVAQRRCEDIQDPDTSQLCVNLEGGYKC |
3 | 1n7dA3 | 0.19 | 0.16 | 5.12 | 1.16 | Neff-PPAS | | -KVCNMARDCRDWSDEPIKECGTNEC---LDNNGGCSHVCNDLKIGYECCPDGFQLV---------AQRRCLCVNLEGGYKC |
4 | 3gawA1 | 0.16 | 0.12 | 4.05 | 0.99 | SPARKS-K | | -EDCNELPPRRNTEI---------LTGSWSDQTYPEGTQAIYK------CRPGYRSLGNVIMVCR----KGEWVALNPLRKC |
5 | 3iysA | 0.17 | 0.17 | 5.60 | 0.33 | FFAS-3D | | -WCPDPAKNENTRYYTPPVLAFTNTTTTILLDENGVGPLCKGDGLFLSAADVARGLPRYFSIQLRKRNVRNPYPVSGLLNSL |
6 | 5ly0A | 0.41 | 0.17 | 5.02 | 0.29 | HHpred | | ------------------------------FLRRKCLPGCVFAPYFP---PEE--P-QKFANVHKVFGAS------------ |
7 | 2y38A3 | 0.20 | 0.15 | 4.68 | 1.02 | MUSTER | | ---CV----C----HGHADVCDAKDPLDPFRLQCACQHNTCGGSC-DRCCPGFNQQPWKPA----TTDSANEC------QSC |
8 | 5v21A | 0.19 | 0.13 | 4.34 | 0.48 | CNFpred | | --QCECTPLSKDERA--GEIACGEDCLNR-LLMIECSSRCP---NGDYCSNRRFQRKQHADVEVILT--------------- |
9 | 5xjoF | 0.21 | 0.04 | 1.16 | 0.60 | HHsearch-2 | | AYKCM----CNNKSYPVP---------------------------------------------------------------- |
10 | 2y38A3 | 0.19 | 0.13 | 4.34 | 1.09 | Neff-PPAS | | --------VC----HGHADVCDAKDPLDPFRLQCACQHNTCGGSC-DRCCPGFNQQ----------PWKPATTDSANECQSC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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