Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | QDVLLFQHQKKVFFRLLGFFCVGQFVFWTYLAHFAFTSLKDIGYKDTVIVGEEGKKLPKLGGVSLNLGSNKWRYGFTVSCLTVGWVILAAGFIFSRRSVHKVLLHRGGQQVTFSTYYPFGTTSSFTVPLREISCMAHRGEVPSMIPVKIKGRPFYFLLDKQGQIYNAKLFDITVGTYR |
1 | 3mmhA | 0.11 | 0.07 | 2.64 | 0.68 | SPARKS-K | | -----------------------------------------------------------MHALHFSASDKAALYREVLPQIESVVAAAVLKEAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPVVVGDVDHIACSSLSRSVVPLFSDGRCIGVLDADLAQFDDALYLGELAKILE |
2 | 2e1vA | 0.13 | 0.12 | 4.09 | 0.53 | FFAS-3D | | --RATFILTRAVINQLVSSFTVACAYIWSCIAKSR--NDKLQLFGFPIDRRARKPPIPTAYAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDNDLVEGPTTTWVSGYDDFGWGKPKKLDHNGAISINSCKESNEDLEIGV-------CISATQDF--VHIFDDGL---- |
3 | 4chmA | 0.13 | 0.06 | 1.94 | 0.24 | HHpred | | ----------------------------------------------------------------------------------------LHRRLLAGMAVCILHYNEADSSLSISC-----EDKVRVIPLSDIKALLHTRDDESCVALHLSGNCIPLR------FDGVKCFVDLL---- |
4 | 1rrvA | 0.10 | 0.09 | 3.34 | 0.66 | MUSTER | | GAAVVAVGD---LAAATGVRSVAEKL-FFYSVPSPVYLASPHLPPAYDEPTTPGVTD----------IRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLLQPDVDAVQTGAWLLSDERPLPPELEAFLAAGSPPVHIG-SSSGRGIADAAKVAVAIRA |
5 | 4eslA | 0.08 | 0.03 | 1.35 | 0.67 | CNFpred | | ----------TPLVTYMAVVFWLMWFLASLGLVLEAVLFLLPW----------------EGVDPLVARTLFWWFGHPIVYFWLLPAYAIIYTILPKQAGGKLVS-------------------------------------------------------------------------- |
6 | 2exnA | 0.11 | 0.07 | 2.42 | 0.51 | HHsearch-2 | | --------------------------------------MSTTAYQIAECGAT-TQSEAAAYQKRWLVANDA------------G-------QWLNRDLCPSVELR--MGYLVLKAP---G-MLRLDIPLDVIED-----DDSVRYQMLVGEQTVDVV-DE-GELAA-AWISNHAGVPE |
7 | 2g80A | 0.08 | 0.07 | 2.71 | 0.67 | Neff-PPAS | | -------------CPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYS---SGSVKAQKLLFGYVQDPNAPAHDSLDLNSYID---GYFDINTSGKKTETQSYANILRDIG |
8 | 2i1aB | 0.23 | 0.05 | 1.58 | 0.31 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------TQVPMLYINIEINNYPVKAFVDTQTTIMSTRLAKKT-GLS- |
9 | 2ve2B3 | 0.09 | 0.09 | 3.40 | 0.66 | SP3 | | KRVAVIDVQTHHGPPHYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDF----FLGWGSLESKNVVVVRETADPKSAVKERLQADHILLASWRIPRTNDLQLGNVGPKGGVQVDEFSRTNVPNIYDITDRLML |
10 | 6bz0A1 | 0.11 | 0.10 | 3.48 | 0.60 | PROSPECTOR2 | | QKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHRYEDTVHHLADHGITTGEVNF---------DLAKLLARKDKIVDQLTGGIDQLLKGNGIEWLKGTGKLLAGKKVEFVP----HEGETQILEPKYVVPVNGRKAYAEGLLAEDSGIK----LTERGLVEVVMAVERIHGHAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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