Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | IPMPQSLQFSPDTAPMKIAHSGFIPSLMTGISDHYIPDMVLQGTVAPTKDFEGALRADLTLASHCATLEQLPTENVAIVANTEKWCVSVMSSHSPSGLSMGHTENPVVMSPLVASMLETVQAMWRVGASPYQCMSFMESKLQEIFMHSETLAAFLLATDFCSMSSVTKALNLSADDVPLLMSVATVHSPQVA |
1 | 5cqcA1 | 0.10 | 0.09 | 3.29 | 0.70 | SPARKS-K | | -SIYPPETSWEVNKGMNSSRLHKLYSLFFDYLGDFRPDVAGYHVDAKNDKLDRRLSEISEFCSKATDITKGVQHQVLLTISYDQLTPTVYDSIGRDTYSESLSGKYRTTCD---EILTQSIEKATEGNCGSYTFRTIKEVISSSAQHVQDIESCIKYRN-LGVVDIESALTEGKTLP--------------- |
2 | 3v42A | 0.10 | 0.08 | 2.89 | 0.68 | FFAS-3D | | ------------------------WHVLMG------NQVIWKS---RDVDLVQSAFEVLRTMIPYSSQYEEAYRCNFLGLSPHVQIAVIVEVHAAASLSKYEFVVTSGSPRVGPTILNKIEAALTNQNLSVDVVDQALVALKEEWMNKVKVLFKFTKVPKEDTQKLLSILGASEEDNVKLLKF--------- |
3 | 3v42A | 0.18 | 0.12 | 3.90 | 0.29 | HHpred | | ---------------------------IIPYSSQYEERCNFLGLSPHV------------------QIPPHVSEFAVIVESLSKYEFVVTSGS-P-----------RVGPTILNKIEA---ALTNQNLSVDVVDQALVALKEEWMNKVKVLFKFTKV-PKEDTQKLLSILGAEEDNVKLLKFWMTGLS---- |
4 | 6ef6A2 | 0.13 | 0.12 | 4.32 | 0.64 | MUSTER | | VG-PDEESLTLWTRPAGFGRFSWDWEHCLGDTPRWGR---WQDAEGVGASETALLTRAQDLLHRKEEYGSGPDRYGLIHADLRLA---LLVDSSTPQRTITDDCSFIEHDPRLGEWQESWVAGYRSRRE----LPAADEAMLPSFVFLRRLLLLAWMGSHTSRESATKAISYAAGSCALAERYLSSDGLRLT |
5 | 3eoqA | 0.12 | 0.08 | 2.95 | 0.55 | CNFpred | | -------------------------------------LYLVALFPGV-ARFPGQVLAHLLGERLHFALVGLAEVASFGLEEADAGTFHAYVQADP-----------ARKGEVLAVLQEELDRLGREGVGEEEVERAKTPLATGLV-LFHLGMEYLYTGRYLSLEEVKARVQVTSREVNALLERG-------- |
6 | 5oqjW | 0.08 | 0.06 | 2.24 | 0.44 | HHsearch-2 | | -PIDDIVK---------NLLKFVVRGFYGG---S---FVLVLSVL-AEDDLKQLLKTELGPLIARLRSDRLISI--HKQREYPPVERVYYY---------------VKYPHAIDAIKWKVHQVVQRYMDSGKKNKEKQDKLNRLMDQIQPI-------------------------IDSLKKIDDSRIGGGG |
7 | 5cwiA | 0.09 | 0.08 | 3.16 | 0.57 | Neff-PPAS | | --------------KKAESEAREARSKAEELRQRHPDSQAARDAQKLASQAEEAVKLACELAQEHPNA-DIAKLCIKAASEAAEAASKAAELAQRHPDS-QAARDAIKLASQAAEAVKLACELAQEHPNADIAKLCIKAASEAAEAASKAAELAQRHPDSQAARDAIKLASQAAEAVKLACELAQEH-PNAD |
8 | 3mkwB1 | 0.16 | 0.04 | 1.22 | 0.35 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------PTSAYERGQRYASRLQNEFAGNISALADAENISRKIITRCINTAK------- |
9 | 1wp9A | 0.09 | 0.08 | 3.16 | 0.56 | SP3 | | LGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPE--------IYKEVRKLLREMLRDALKPLAETGLLESSSPD-------IPKKEVLRAGQNEEMAKGNHDLRGLLLYHAMALKLHHAIELLETQG--LSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKLLVQAKEIGLDHPKMDKLKEIIREQKQNSK |
10 | 6ef6A2 | 0.13 | 0.11 | 4.01 | 0.76 | PROSPECTOR2 | | VGEPDEESLTLDTRPAGFGRFSWDWEHCLGDTPRWGR---WQDAEGVGASETALLTRAQDLLHRKEYGSGPDRYGLILLVDSSTPQRTITTAVSFIEHDPR-----------LGEWQESWVAGYRSRRELP---AADEAMLPSFVFLRRLLLLAWMGSHTHSRESATKAISYAAGSCALAERYLSSDGLRLT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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