Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | PSPGIVRKKKIAIGVIFSLSRDEDENNKFNEFFFSHFPLFESHMNKLKSAIEQAMKMSRRSADASQRSLAYNRIVDALNEFRTTICNLYTMPRIGEPVWLTMMSGTPEKNQLCHRFMKEFTFLMENAAKNQFLPALLTAVLTNHLAWVPTVMPNGQPPIRIFLEKHSSQSVDMLAKTHPYNPLWAQLGDLYGAIGSPVRLAKTVVVGKRHDLVQRLLYFLTYFIRCSELQ |
1 | 4xhjA | 0.09 | 0.08 | 3.14 | 0.64 | SPARKS-K | | NPPGPDPGPSYRVYLLGRGLDMNFSKHATVDICYPEESL--DYRYHLSMAHTEALRMTTKADQHDINEESYYHIAARIATSIFALSEMGRTTE-----YFLL-----DEIVDVQYQLKFLNYILMRIDPSQLHDELSLLFARDQLKTAYALSRGQDHVNLSLARRVIMSIYKGLLVKQNLNTERQALFFASMILLNFS---------SRVLDGRTTLLLMTSMCTAAHAT |
2 | 3d19A | 0.11 | 0.10 | 3.57 | 0.86 | FFAS-3D | | ------------------VTSVMFVERSLNEIRFEHSFFLRLEANQFYRLFEHIEQIAHSYTNETDPEQIKRFNAEVIWGFKRKILGLILTCKLPFPLLVD------HTSREADYFRKRLIQLNEGKLDALPENVFFLRIMADHAKFIGHLLDPSERKLVDTARNFSNDFDELMYQQSQTAPLLDQFLDVASLRDFKKTARDLIEQCKHPLLADHVFREADRFLE----- |
3 | 3ismC2 | 0.09 | 0.05 | 1.80 | 0.25 | HHpred | | -------------------------LEEYRTLMKRHQASVKKIAAAAREIIWKLLFD-------GTSAEDQNKAAELLQEYKGDAGFY-------------------GPD-DYNSWIFNLRDEVLTKELLDFWRKMVK----MELGPSCARDSDYYPLPFEFYE--------KAGCKAPFE------------------------------------------------- |
4 | 5cwpA | 0.13 | 0.12 | 4.09 | 0.67 | MUSTER | | MSSDEEEAREL-------IERAKEAAERAQEAAERT-PRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEV---------RELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELAREVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREA-SGDPEKREKARERVREAVERAEEVQ |
5 | 4c0pA | 0.09 | 0.07 | 2.83 | 0.69 | CNFpred | | ---------------------DNRIVERCCRCLRFAVRCVG-LLQPLVTQMVNVYHVHQHSC----FLYLGSILVDEYGMCRQGLLDMLQAL---CIPTFQLLEGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWAIASTT-------LDHRDANCS-VMRFLRDLIHTGVFELRKELIGQVMNQLGQ--QLVSQLLHTCPPYTLPDVAEVLWEIMQVDRPT |
6 | 2pffB | 0.17 | 0.17 | 5.57 | 0.71 | HHsearch-2 | | QFNKILPEPTEGFAADDEPTTPANDIHALAALLQENDTTLVKTKELIKNYITAR-IMAKRSNSANNTDDYFHVLVGDLIKFSETLSELIRTTGLNILEWLENPSNTSIPISCPLIGVIQLHYVVTYLKGATHSQGLVTAVIAETDSWESFFVPNTSLPPSILLENNEGVPSPMLSSNLTQEQVQVNKTNSHLPAGKQVEIAKLVVSGPPLKFSNRFLPVASPFHSHLLVP |
7 | 4bg0A | 0.08 | 0.07 | 2.87 | 0.74 | Neff-PPAS | | ----------------------GRLNQRNINELKIFVEKAKYYSIKLDAIYNECTGAYNDIMTYSD-QSKVNQAISIFKKDNKIVNKFKELEKIIEE------YKPMFLSKLIDDFAIELDQAVDNARHADSYKKLRKSVVLAYIESFDVISSKFVDSKFVEASKKFVNKAKEFVEENDLIALECIVKTIGDMVNDREINSRSRYNNFYKKEADFLGAAVELEGAYKAIK |
8 | 5hiuA2 | 0.11 | 0.04 | 1.42 | 0.47 | HHsearch | | ----------------------------------------------------------------SIP-------TNKLKYCIQVLSSIHLVPSLQKEAWHTISIIC--RSHHGQSTVRILLDFLRSYSPKDTVRDVRGALSLQKLLRKTA------------------------------------------EKGYPQV------------------------------- |
9 | 1wp9A | 0.08 | 0.08 | 3.05 | 0.64 | SP3 | | PGSTPEKIMEVGIEHIEYRSENSPDVRPYEWVRVDLPEIYKEVRKLLREMLRDALKPLAETGLLESSSPDIP--KKEVLRAGQIINEEMAKGNHDL--------RGLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAG----STKASKEIFSDKRMKKAISLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVNELVKDIKAKRFV |
10 | 3jyhA2 | 0.07 | 0.07 | 2.87 | 0.78 | PROSPECTOR2 | | DNFERFGNKTFPQRFLVSDRFWVRGNEGDVWAFANNSAFVAELAAERGALLFGAQSTQRGHTELLTVEQALADFAELLRALRRDYLRMKYPHLVAPVLAVAGLGDSNQFFRDVTADFEGQCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDTWGVWPRPD---WLLTSFWGGDLRAASNIIFSNGNLVEARKLEATIIGEWVKAARRE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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