>PF14609 (606 residues) VISSVEGIAEKQSILGREDVANCLHARLAELDQVSSNWRVKLGIANVLHLLLTLSAHPRD VVWPKEEQEEDISDELASEKLINQDDTYLSAPFEGEHWDIPNWESSDSDTSVTFYEETPP VIPDNENIQDPQYYPHAKVSEHTEDYAYQQYEDPVSHASETLLQRILEKESSGTPQLLQL SQQSMLYEIIYMLMGYQGHIFTCVEGVFRPAPFDYFQIQGLSTSMQEHILSNFCNWGREL HILNRVASTKHCRFLPSSPSDIERLPPFIFQIMTVWMNETVQNELLRMELLVRKHAYNIL KLEHDVTDLIVFVELLTKRLISGCTSVDEFLHCIFNIHIGRRSNSLHFGEFFSKLYYETL STFLNISKIDAGYALPTPLLYIIKTSQRVNRQAAKSLLKQTSEKYFAESCSESQAPSFLV FVLRYQQALYELTTIQETEKQSDLTVQDTSQLSAGSFSLELSDTLQSYTLRFKEAYLALN QKKANKYVYGHLVFMKTVYDFLLLLSWECSSGGVSIFLKDILTKRVLDLFNAALSCVHTD SLADVLKTSVSNANDNDRAVPTSEDCNSPCIMTYLAHILIHPSQPIALEAFHYRSTLSKG IMNTMP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | VISSVEGIAEKQSILGREDVANCLHARLAELDQVSSNWRVKLGIANVLHLLLTLSAHPRDVVWPKEEQEEDISDELASEKLINQDDTYLSAPFEGEHWDIPNWESSDSDTSVTFYEETPPVIPDNENIQDPQYYPHAKVSEHTEDYAYQQYEDPVSHASETLLQRILEKESSGTPQLLQLSQQSMLYEIIYMLMGYQGHIFTCVEGVFRPAPFDYFQIQGLSTSMQEHILSNFCNWGRELHILNRVASTKHCRFLPSSPSDIERLPPFIFQIMTVWMNETVQNELLRMELLVRKHAYNILKLEHDVTDLIVFVELLTKRLISGCTSVDEFLHCIFNIHIGRRSNSLHFGEFFSKLYYETLSTFLNISKIDAGYALPTPLLYIIKTSQRVNRQAAKSLLKQTSEKYFAESCSESQAPSFLVFVLRYQQALYELTTIQETEKQSDLTVQDTSQLSAGSFSLELSDTLQSYTLRFKEAYLALNQKKANKYVYGHLVFMKTVYDFLLLLSWECSSGGVSIFLKDILTKRVLDLFNAALSCVHTDSLADVLKTSVSNANDNDRAVPTSEDCNSPCIMTYLAHILIHPSQPIALEAFHYRSTLSKGIMNTMP | |||||||||||||||||||
1 | 3ripA | 0.13 | 0.08 | 2.65 | 1.14 | SPARKS-K | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIHELLLALSGYPGSIFT-------WNKRSGLQVSQFLHPSETSVLNRLCRLGTDYIRFTEFIEGLHGIYLRAFCTGLDSVL------------QPYRQALLDLEQEFLGDPH--LSISHVNYFLQLLFPSVMVVVEQIKSQKIHGCQILETVYKHLPPVRSALEKILAVCHGVMYKQLSAWMLHG--LLLDQHEEFFIKQGSLKQF-----------------SLRVEILPRVAEKILFVGESVQMFENNVNLTSILK--------NQEDTFAAELHRLKVDFEQVVDRIRSTVAEHLWKLMVEESLGQLKIIKDFYLLGRG---------ELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEVVFKYLLSVRRVKSNQTDAIKWRLRNHMAFLVDNLQY | |||||||||||||
2 | 1b3uA | 0.11 | 0.10 | 3.68 | 1.10 | MUSTER | SLYPIAVLIDELR---NED-VQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVE-----RAISHEHSPSDLEAHFVPLVKRLAGGD-WFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSE---SNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFT----ELQKAVGPEITKTDLVPAFQNLMKDCE-----AEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEH--LLPLFLAQLKDECPEV-RLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEKWRVRLAIIEYMPL------LAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKF---KEWAHATIIPKVLAMSGDPNYNVLSEVCQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSE------VKPILEKLTQDQDVDV-------KYFAQEALTVLSL | |||||||||||||
3 | 5flzA | 0.10 | 0.06 | 2.27 | 2.02 | FFAS-3D | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QEALVVKDLLNVLIGLEGTYIRYFND-------IEFKIAKKMDPSFKTFSRRIVRYGKQYMILTRAYEKWSDTSFGMVLQR------FAYEIRRFLEDVYLKTLVERLERDFNKVPNFSIRVNKQMELLYNIYEEIFREIEERRTKGGAILKIFQQKIL-ENLGDRSSVMFLKKLLNNISQDYCTMLYLTQGILNDPYQEFMTYDDWDTQ------------YFIRKDVLLRDCDSEEDKNLLFKMLRTGILLKVVRASLQ------IPTIPSNSSDITIQEINDSNLELYVDKCYSRA-NEIFLKLFFQGYDLLKHLQQIFLGYQS-------GHNVLK-FLTKNMGELTKHYRNDNNANYDKLLQNFELERQSENPNNMIQFDTETKSAIYHLK-FDINIPYPLNMIKY---QIILRYQLVL-- | |||||||||||||
4 | 5mqfM | 0.08 | 0.07 | 2.86 | 1.78 | Neff-PPAS | -PESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHV--------HEWHKRVALHQGRPREIINTYTEAVQTVDFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFK-QVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLA--DLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKY-------------------------------------FEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRT---------TGAFWQTWKDFEVRHGNEDTIKEMLRIRRSVQATYNTQV- | |||||||||||||
5 | 3ripA | 0.13 | 0.08 | 2.73 | 4.21 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIHELLLALSGYPGSIFTWNKRS-GLQVSQD--FPFLHPS-ETSVLNRLCRLGTDYIRFTEIEQGLHGIYLRAFCTGL-----------DSVLQPY-RQALLDLEQEFLGD-P-HLSISHVNYFLDQFQLLFPSVVVEQISQKIHGCQILETVYKGLPPVRSALEKILAVCHGVMYKQLSAWML--HGLLLDQHEEFFIKQG-----------SLKQF------SLRVEILPSYIEKILFVGESVQMFENNVN-LTSILKQEDRLKQQPLF-SLVDFEQVVDRIR---STVAEHLWKLMEESDLLGQLKIIK---DFYLLGRG------------ELFQ-AFIDTAQHMLKTPTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTEYHAGWAALGLSYKVQWPLTPAVLKYNVVFKYLLS---- | |||||||||||||
6 | 3ripA | 0.13 | 0.08 | 2.79 | 1.40 | CNFpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIHELLLALSGYPGSIFTWNK-------RSGLQVSQDLHPSETSVLNRLCRLGTDYIRFTEFIEQYHGIYLRAFCTGLD-----------SVLQPYR-QALLDLEQEFLG--DPHLSISHVNYFLDQFQLLFPMVVVEQIKSKIHGCQILETVYKGLPPVRSALEKILAVCHGVMYKQLSAWMLH--GLLLDQHEEFFIKQG-----------SLKQFSL-RVEILPSYIPVRVAEKILFVGESVQMFEN-QEDTFAAELHRLK---QQPLFSLVDFEQVVDRIRSTVAEHLWKLMVE--ESDLLGQLKII---KDFYLLGRGE---------LFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTILGLSYKVQWPLHIL---FTPAVLEKYNVVFKYLLSVRR | |||||||||||||
7 | 2bkuB | 0.07 | 0.06 | 2.71 | 1.44 | PROSPECTOR2 | MTAEFAQLLENSILSPDQNIRLTSETQLKKLSNDN--------FLQFAGLSSQVLIDENTNELVSKDSVKTQQFAQRWITTALVSIEIADIELPHGAWPELNTGAEQPEESADALVSSQSTETSKALIFIKNNMEREGERNYLMQVVCEATQAEDSPNDKVASMTVEFWQFPQSPLQSYNFALSSIKDVVPNL-------LNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNLEPVLEFVEQNITADNWRNREAAVMAFGPDKVQRTYYVHQALPSILNWCIGRIADSVAESIDPQQHLPGVVQACLIGLINLVEQLAEATPSPIYNFALVDGLIGNEFNARASAFSALTTMVESISTFVMDKLGQTMSVDENQLTLAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEAASLGKGFEKYLETFYLLKALNQVDSPVVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMLEALDYQIKVLEAVLDAYGIVAGLHDKPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQF--YGQDWVIDYIKRTRSGQLFSQATKDTARWAREQQKRQLSL | |||||||||||||
8 | 5flzB | 0.12 | 0.07 | 2.55 | 3.26 | HHsearch-2 | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEEDILKYVSYTLLATTSALFPFDHE--------QIQIPSKIPNFESGLLHLIFEAGLLYQSLGYVEKLNISPMKKALIIEI-----------SEELQNY-TAFVNNLVSSG----T-VVSLKSLYREIYENIIRLRIRFTEHL-EELSGDTFLIELNIGDLTIRKIATNLFNSMISLYYEYLMNWLT--KGLLRATYGEFFIAEN-----------YHIPI------EFNQERVPAFAYKIFMIGKSYIFLEKYCKE-VQWTNEFSVYQSNSYRGISTNFFEIINDQY---SEIVNHTNQILQKFHYRDVVFALK---NILLMGKS------------DFMD-ALIEKANDILATPPNYKLTRVLQEAVQLSSLRHLMNSPRNSS----VINGLFTLDYILYPPLNVFGREYLRIFNKEMLKSND | |||||||||||||
9 | 5flzB | 0.12 | 0.07 | 2.50 | 5.22 | HHsearch | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEEDILKYVSYTLLATTSALFPFDHE--------QIQIPSKIPNFESGLLHLIFEAGLLYQSLGYVEKLNISPMKKALIIEI-----------SEELQNY-TAFVNNLVSSG----T-VVSLKSLYREIYENIIRLRIRFTEHL-EELSGDTFLIELNIGDLTIRKIATNLFNSMISLYYEYLMNWLT--KGLLRATYGEFFIAEN-----------YHIPI------EFNQERVPAFAYKIFMIGKSYIFLEKYCKEVQWTNEFYHVYQSNSYRGISTNFFEIINDQY---SEIVNHTNQILQKFHYRDVVFALK---NILLMGKS------------DFMD-ALIEKANDILATPPNYKLTRVLQEAVQLSSLRHLMNSPRNSS----VINGLDRVLYILYPPLNVFGREYLRIFN-FLWRFK- | |||||||||||||
10 | 1b3uA | 0.07 | 0.06 | 2.61 | 1.56 | Neff-PPAS | SLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALG----VERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKHEHSPSDLEAHFVPLVKRLAGGDW-------------FTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKD---------CEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILG--------------------------KDNTIEHLLPLFLAQLKDEC-----PEVRLNIISN---LDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDP-NYLHRMTTLFCINVLSEVC---------GQDITTKHMLPTVLRMAGDPV-------ANVRFNVAKSLQKIGP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |