Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | GTRESYYREVLKENVESGKNRTLLKTQDSLTPGYYGPRGLRAMTEYIMRTLSSVVRKRAVEDRLVSARGYTGYVQVVLVPELAVRLIMEDMSVAEEDARKIMEDSIEFGELLHE |
1 | 5cwpA2 | 0.14 | 0.13 | 4.47 | 0.78 | SPARKS-K | | SSDVNEALKLIVEAIEAAVRALEAAERTGD-------PEVRELARELVRLAVEAAEEVQRNPS--SEEVNEALKKIVKAIQEAVESLREAEESDPEKREKARERVREAVERAEE |
2 | 5h11A1 | 0.09 | 0.09 | 3.37 | 0.68 | FFAS-3D | | GPLGSQLIQEFTAAQRRGEIGRMREVAAVLLHFKGYAHCVDVYIKQVFEDIAILCQRVNKQVGEVFCSPMAKLIQSIFIQAHVKERLDETRNSDVEQYLKNLTRTTALAAKLTD |
3 | 3kfuF2 | 0.15 | 0.11 | 3.86 | 0.25 | HHpred | | --------KDAEVLAY---TPSLARFLDQALPLG-L-ASPQALANWLLADVAGLLHERGL-RLEETRLSPEGLARLV-------GL-FERGEVTSRVAKSLLPEVLE-GQ--DP |
4 | 1st6A | 0.12 | 0.11 | 4.01 | 0.67 | MUSTER | | GQGATPMAMQKAQQVSQGLDLLTAKVENA-------ARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKE-RDDILRSLGEISALTAKLSD |
5 | 5b86A | 0.05 | 0.04 | 2.01 | 0.52 | CNFpred | | ------ILQIISQGQTKAEN--------------ITSDVGMQIKQLLLVELAALLRSYQRFDEFLEKSYRVNIMANINNCLFFWTSVEQKWQISHDSLNRLLEPLKDLKAHGFD |
6 | 1vt4I3 | 0.11 | 0.11 | 3.77 | 0.65 | HHsearch-2 | | ------EYALHRSIVD-HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKTLFRMVEQKIDAWNASGSILNTLQQLKFERLVNAILDFLPKIEENSYTDLLRIALMAEDE-AIFEE |
7 | 5cwmA1 | 0.13 | 0.12 | 4.25 | 0.80 | Neff-PPAS | | -----DPEDELKRVEKLVKEAEELLRQAKEKGS---EEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSALERALRVAEEAARLAKRVLE |
8 | 1qo0E2 | 0.13 | 0.06 | 2.13 | 0.42 | HHsearch | | ---------------------------------------MAKL-KQKTEQLQDR-------------------IAGQARINQAKVLLMQRHGWDEREAHQHLSREAMKREPIL- |
9 | 4yy2A | 0.12 | 0.11 | 3.71 | 1.00 | SP3 | | GKSPTEVLLELIAEASGTTREEVKEKFLKELRK--GKSPTEVLLELIAEASGTTKEEVKEKFLKELSFGKS-------PTEVLLELIAEASGTTKEEVKKKFWKELSL------ |
10 | 5gp9A2 | 0.11 | 0.11 | 3.83 | 0.62 | PROSPECTOR2 | | TDVEEKLKILVNMHFKQLAADHKLAIVTQLELRQSNTELRLKILKGYLNLLDELLMEGKEKGYFFQELDTRLARQMITLDEVVTNWVMKDCKYDLTALVKPVHQLLLGG-LRHR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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