Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | RKMFDSLDPSRSARPVFLEPNVLSQGPGWLVWWMKPQTRRVWFESKEIKLETAEVPHPGLVFAVTQEEWRVFAVQGRSRPRPGTKLYQAPYWNVWKGGRICAGSARLPSAGLQADPSGWEESFFSSRFSHPNIHEKDALVKYKGGSAKFWNAMLSGKFKSFPQEVLVP |
1 | 3gbgA1 | 0.04 | 0.04 | 1.79 | 0.90 | SPARKS-K | | --KKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCL---VSYEIN-SSSIILLKKNSIQRFSLTSL--SDENINVSVITISDILGNKDLLLWNCE-------HNDIAVLSEVVNGF-------REI---NYSDFFSGFFSKVEKKYNSIFIT----- |
2 | 3o2uA | 0.16 | 0.14 | 4.54 | 0.51 | FFAS-3D | | IRLKRDLDS--------LDLP-------------PTVTLNVITSPDSADRSQEVIVRPD-EGYYNYGSINFNLDFNEVYPIELKKIFH-P--NIDLKGNVCLNEDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAKLLCEGEKEFAEAVRLTMSGEHVKYD-NIVSP |
3 | 3c5yE | 0.11 | 0.07 | 2.39 | 0.32 | HHpred | | ---------------------------------------------------KASLTYVDFVVTG-GTG---GSLAANA-PGVFCGLVIDPTDGQINDGNIS-PYSKGFGWAAELNLQDVYRKLFDGERGLGYPRE--RAEI--RKNRGILRELKDASCRDL--TVLK- |
4 | 2pnlA | 0.07 | 0.07 | 2.89 | 0.74 | MUSTER | | RALKNRLESANYEEVELPPSKVVHTVKSA-----PGEAFGSLAIIIPGEYPELLDANQQVLSHFANDTGSVWGIGEDIPFEGDNCYTALPLKEIKRNGNIVVEKIFAGPPSAQLGLSLLVNDIVPRVFTGEIADDEETIIPICG--VDIAAIAAHEQGLPLNQPGVDE |
5 | 5ogsA | 0.15 | 0.07 | 2.21 | 1.01 | CNFpred | | -------------------IEAICLGQGWAAAATSALLLRLFTIG-GVQKEVFSLAGPVVSMAGHGEQLFIVYHRG--TGFDGDQCLGVQLLELGK------------------------------------------------------------------------ |
6 | 4ds2A | 0.15 | 0.11 | 3.82 | 0.36 | HHsearch-2 | | KRIIKDLKLLLEENEA-SPHSTAIFDDTIYNWI-------LKVKAPAD------SVYGGNTYQLS--------VLSDDYPRFVTPVYS---PLVTGEGGICDRMVNTPDQ-HASDIKLVLDRVFSQYKSRRDVNPE-ARHYLEKFPQDFAA-RV----RRG------- |
7 | 2pnlA | 0.07 | 0.07 | 2.92 | 0.92 | Neff-PPAS | | RALKNRLESANYEEVELPPSKGVIVPVVHTVKSAPGEAFGSLAIIIPGEYPELLDANQQVLSHFANDTGSVWGIGEDIPFEGDNCYTALPLKEIKRNGNIVVEKIFAGPIGPSAQLGLSLLVNDIEDFTGEIADDEETIIPICG--VDIAAIAAHEQGLPLNQPGVDE |
8 | 4r62A | 0.15 | 0.11 | 3.83 | 0.60 | HHsearch | | RRLMRDFKRMKE----DAPPGVSASPDNVMVWN-------AMIIGPAD-T-----PYEDGTFRLL--------LEDEEYPKFLSEMFH---PNVYANGEIKLDILQNPTY-DVAILTSIQSL-FNDPNPASPANVE-AATLFKDHKSQYVKRVKETVEKS----W-E- |
9 | 3trdA1 | 0.09 | 0.05 | 2.06 | 0.65 | SP3 | | --------------------------------------------SYVMTNEDFLIQGP-------VGQLEVMITRPKGIEKSVTGIIC-------------HPHPLHGGTMNNKVVTTLAKALDELGLKFRGVGKSQGRYDNGVGEVEDLKAVLRWVEHHWSQDDIW- |
10 | 3qsqA | 0.11 | 0.10 | 3.64 | 0.62 | PROSPECTOR2 | | EQVLLTVGPPMAPNTANSQNWVNKTIVPVKIGIDLEHYESVSWYTADFQPSDEPSPIPGLYARVNNTKKDVYGVRGAESGSNVSNLKIRDQTYHFTQGKTVMHDGPTSSGWVWMNQE------LTNNIAYRVDPGMMYLITPPPA----------ASQLYFELHTVLP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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