Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VDPKVSRAKFDREISRFRAYADAYRMQGCFLIEESFPSAFFIFASPKVKPRVIGAAIEIDFTNYDLRPLSVVFVDPFTRQPIARKDLPLNMLRRPQLPGTPTEMISNLIQQNAVSLTDFIQANSLEDQPFLCMAGVREYHDNPAHSGDPWLLHRGSGEGCLAFILDKIIKYGTGPAE |
1 | 5nkzA | 0.17 | 0.13 | 4.29 | 0.86 | SPARKS-K | | ---ASTEKRLLKEYRAVKKELTEIHDTGIVDLHPGLFRWSAVIRGPDQSPFEALWKLEIDITNYPLDPPKIKFVV-------FGEEKIRQLQRKTSSGARKV-------------CYKMPHPNVNFKTGEICL----------DILQQKW-----SPAWTLQSALVAIVVLLANPEP |
2 | 5nkzA | 0.16 | 0.12 | 4.12 | 0.82 | FFAS-3D | | -----TEKRLLKEYRAVKKELTEIHDTGIVDLHPGLFRWSAVIRGPDQSPEDALWKLEIDITNYPLDPPKIKFVVF--------------------GEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICLD----------ILQQKW-----SPAWTLQSALVAIVVLLANP-- |
3 | 2cyxA | 0.15 | 0.11 | 3.59 | 0.36 | HHpred | | -MAGTALKRLMAEYKQLTLNP----PEGIVAGPMNFFEWEALIMGPEDTCFEGVFPAILSFLDYPLSPPKMRFTCE-MFH-----------------P--------NIY---------------PDG--RVCISILHAPGDDPMGYAERW-----SPVQSVEKILLSVVSMLAEPN- |
4 | 5knlC | 0.11 | 0.10 | 3.46 | 0.70 | MUSTER | | MPSSASEQLLRKQLKEIQKNPPQ----GFSVGLVD--EWEVMIIGPEDTL--GFFHATLSFQDYPLMPPKMKFTTEIWHPNVHPNEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISSSPNDESP----------------NIDAAKEFRENPQEFKKRVRRLVRRSIEMILE |
5 | 3cegA | 0.10 | 0.07 | 2.71 | 0.89 | CNFpred | | --SAARARRLAQEAVTLSTSLPLSSSSSVFVRCDRLDIMKVLITGPADTPYNGCFEFDVYFPDYPSSPPLVNLETTG-----HSVRFNPNLYND----------------------------------GKVCLSILNTWH---GRPEEKWNPQT----SSFLQVLVSVQSLILVAEP |
6 | 5knlC | 0.15 | 0.11 | 3.60 | 0.61 | HHsearch-2 | | MPSSASEQLLRKQLKEIQKNP----PQGFSVGLVDIFEWEVMIIGPEDTLYEGFFHATLSFQDYPLMPPKMKFTTE-IWHPN-------------------------V------------H---PNG--EVCISILHPPGDDKEDAGERWL-----PVHSPETILISVISMLSSPND |
7 | 2aacA | 0.09 | 0.08 | 3.04 | 0.67 | Neff-PPAS | | NDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQ-----GVVKNQGREFVCRPGDILLFPPGE------------IHHYGRHPEAREWYHQWVYFRPRAYWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSAINLLEQLLLRRMEAIN |
8 | 5knlC | 0.16 | 0.11 | 3.75 | 0.62 | HHsearch | | MPSSASEQLLRKQLKEIQKNP----PQGFSVGLVDIFEWEVMIIGPEDTLYEGFFHATLSFQDYPLMPPKMKFTTE-IWH-----------------P--------NVH---------------PNG--EVCISILHPPGDDYEDAGERWL-----PVHSPETILISVISMLSSPN- |
9 | 1ylaA | 0.15 | 0.14 | 4.73 | 0.78 | SP3 | | SMANIAVQRIKREFKEVLKSEETSKNQKVDLVDENFTELRGEIAGPPDTPEGGRYQLEIKIETYPFNPPKVRFITKIWHPNISSVAICLDILKDQWAAAMTLRTVLLSLQALLAAAEP---DDPQDAVV------ANQYKQNPEYAGAP------VSSPEYTKKIENLCAMGFDRNA |
10 | 4q3oA | 0.09 | 0.08 | 3.28 | 0.67 | PROSPECTOR2 | | TTAAQWRDYVQATNKMQKTKIKNMRKHGVTVELLDIKGVTVRKITPKSLSPEFKVVYSVDYRMPVATPRAIYAGTPWADLTKTGDSLYTNEGIDRILITYDGTLGASARLPLTHPKLSPIYGDFTDFPPTFLVTGTVRVNRKMRDAGVTADYLVSHQTPESQSVYRQLKRF-LVGFT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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