Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MVTATFRFYEELNDFLAPSQRRRDLSCPCARAATVKHMIEALGVPHTEVELILVNGESVPFEQILQDGDRVAVYPKFESLD |
1 | 1vjkA | 0.25 | 0.22 | 6.90 | 2.46 | SPARKS-K | | SVKVKVKYFARFRQLAGVD----EEEIELPEGARVRDLIEEIKEVFGEGVNIAVNGRYVSWDEELKDGDVVGVFPPV---- |
2 | 1vjkA | 0.25 | 0.22 | 6.90 | 1.42 | FFAS-3D | | SVKVKVKYFARFRQLAG----VDEEEIELPEGARVRDLIEEIGYDEDADVNIAVNGRYVSWDEELKDGDVVGVFPPV---- |
3 | 3po0A | 0.20 | 0.19 | 5.93 | 1.22 | HHpred | | -GSMEWKLFADLAEVAGSR----TVRVDVDGDATVGDALDALVGAHPAHINVLRNGEAAALGEATAAGDELALFPPVSGG- |
4 | 6jc0C | 0.22 | 0.21 | 6.60 | 2.56 | MUSTER | | TVRVTVRYFAAAAAAAGIE----TESLEIATGTSVAELVERLGARNPELASYLCDEVAVDMAKPLVTPQTVDVLPPFAGG- |
5 | 1vjkA | 0.25 | 0.22 | 6.89 | 1.35 | CNFpred | | SVKVKVKYFARFRQLAG----VDEEEIELPEGARVRDLIEEIKKRH-ADVNIAVNGRYVSWDEELKDGDVVGVFPPV---- |
6 | 6jbzB | 0.22 | 0.21 | 6.60 | 1.06 | HHsearch-2 | | GIQVTVRYFAAARAAAGAG----SEKVTLRSGATVAELIDGLSVRDVRLCSYLRDGIVVRDDVALSAGDTIDVLPPFAGG- |
7 | 6jc0C | 0.22 | 0.21 | 6.60 | 2.59 | Neff-PPAS | | TVRVTVRYFAAAAAAAGI----ETESLEIATGTSVAELVERLGARNPELCSYLCDEVAVDMAKPLVTPQTVDVLPPFAGG- |
8 | 6jbzB | 0.22 | 0.21 | 6.60 | 1.80 | HHsearch | | GIQVTVRYFAAARAAAGAG----SEKVTLRSGATVAELIDGLSVRDVRLCSYLRDGIVVRDDVALSAGDTIDVLPPFAGG- |
9 | 1vjkA | 0.25 | 0.22 | 6.90 | 0.93 | PROSPECTOR2 | | SVKVKVKYFARFRQLAGVD----EEEIELPEGARVRDLIEEIGYDEDADVNIAVNGRYVSWDEELKDGDVVGVFPPV---- |
10 | 2m19A | 0.23 | 0.21 | 6.58 | 0.85 | SAM | | -MELELRFFATFREVVGQK----SIYWRVDDDATVGDVLRSLEAEYDPHVNVLKNGREVGMATALDDGDAVSVFPPVAG-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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